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SCNpilot_expt_500_bf_scaffold_26273_1

Organism: SCNpilot_expt_500_bf_step10_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 15 / 38 MC: 13
Location: 1..1365

Top 3 Functional Annotations

Value Algorithm Source
Low density lipoprotein receptor n=1 Tax=Philodina roseola RepID=B2L3N0_PHIRO similarity UNIREF
DB: UNIREF100
  • Identity: 43.1
  • Coverage: 487.0
  • Bit_score: 399
  • Evalue 5.60e-108
Low density lipoprotein receptor {ECO:0000313|EMBL:ACC43940.1}; TaxID=96448 species="Eukaryota; Metazoa; Lophotrochozoa; Rotifera; Bdelloidea; Philodinida; Philodinidae; Philodina.;" source="Philodina roseola (Rotifer).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.7
  • Coverage: 487.0
  • Bit_score: 399
  • Evalue 7.80e-108

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Taxonomy

Philodina roseola → Philodina → Philodinida → Bdelloidea → Rotifera → Metazoa

Sequences

DNA sequence
Length: 1365
CCAAGTTATTATGGTTCACAATGTCAATATCAAAATCAACGTATTAGTTTAACATTACAATTTCGTGCATCATCTGATTCTATACAAATACCATTTATTATTATTATTTCATTAATTGATAATAGTCAAGAACGAATGATTCATTCAACTGAACAAGTTACTTATCTATCATCTAAACATTGTCAAACAAAATTTCATTTTTATTTGTTATATTCAACACGACCCAAAGATCTATCGAAAGAATATTTTCTTCATATTGATATTTATGAAAAAATAACATTAAAATATCGAGCAAGTTTTATTCAGCAAATTCAATTTCCATTTTTGGCAGTTCATCGTCTTTCTCAGATATTAACTATACCTTATCAACGTAATTCAATTGAATCTTGTTCAGATAAACAATGTGAACATGGTCAATGTATTCGTTATGCCAATGATATGACTAATCAAAGTTTTTGTCAATGTGATCGTGGTTGGCGAGGAGAAACTTGTTCTATAGAGTATGATTGTCAATGTTCAGTAAATGCAGTATGTCTTGGTCAAATGATGAATAATCGATCAATATGTATTTGTCCATTACATCGAAAAGGTCCAAAATGTTTAATTGAAGATAAAATATGTGCAAATCAGACTTGTTCAAATCGTGGTCAATGTGTTTCACTTGATGAATATGAAAAAGAATTTATTTGTATTTGTGAAAATGATGATACGGTGGGTGAATTTTGTCAATTTAATGGAGCAAAGTTAGTTATATCATTTCATGAAAATATTCAATTACCATCAACAGTATTAATTCATTTTATTGAAATAAAAATGAAAAGTGAACCAAGAAATACAAAAATTATAAAAACAATTTATCCTGGACAACAATCCTTATCTATTCGTTGGTCATTACCATTTCATCTTGTTTTTACTCAATTTGATAATCAAACATTTTATTTAACTTTAATACAAAAAAATTATCAACCATCATCAATTATCGGAAAAACAGTTGAAGAATCAGATCGATGTTTACATATAAGAGATTTATTTAATCAAACAATTGTGAATAGTCCTATTGTGCATCGAATTAAATATTATCATCTACCTTGTCAAAGATCTGAACTCGATTTACGATGTTTTTATGATAATTATCGATTATGTTTCTGTCAGGAAGTAGTTGGTTATCGTGTTGCGAATTGTTTTGATTTTAATAGCACAAAGAAATCGATTTGTACAGGATTTAATGCTTGTAAAAACGATGGTATATGTTATCAAGAAGATACGACTTGTTCAAGATTATCAATTTGTCAATGTCAACCTTGTTTCTATGGTGCACAATGTGATATAACAACAAATTCATTTAATTTATCACTTGATGCTATT
PROTEIN sequence
Length: 455
PSYYGSQCQYQNQRISLTLQFRASSDSIQIPFIIIISLIDNSQERMIHSTEQVTYLSSKHCQTKFHFYLLYSTRPKDLSKEYFLHIDIYEKITLKYRASFIQQIQFPFLAVHRLSQILTIPYQRNSIESCSDKQCEHGQCIRYANDMTNQSFCQCDRGWRGETCSIEYDCQCSVNAVCLGQMMNNRSICICPLHRKGPKCLIEDKICANQTCSNRGQCVSLDEYEKEFICICENDDTVGEFCQFNGAKLVISFHENIQLPSTVLIHFIEIKMKSEPRNTKIIKTIYPGQQSLSIRWSLPFHLVFTQFDNQTFYLTLIQKNYQPSSIIGKTVEESDRCLHIRDLFNQTIVNSPIVHRIKYYHLPCQRSELDLRCFYDNYRLCFCQEVVGYRVANCFDFNSTKKSICTGFNACKNDGICYQEDTTCSRLSICQCQPCFYGAQCDITTNSFNLSLDAI