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SCNpilot_expt_500_bf_scaffold_20491_1

Organism: SCNpilot_expt_500_bf_step10_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 15 / 38 MC: 13
Location: comp(1..1725)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.4
  • Coverage: 575.0
  • Bit_score: 997
  • Evalue 6.30e-288
rpoB; RNA polymerase subunit beta (EC:2.7.7.6); K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 86.8
  • Coverage: 575.0
  • Bit_score: 995
  • Evalue 5.40e-288
DNA-directed RNA polymerase subunit beta n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00037C01C9 similarity UNIREF
DB: UNIREF100
  • Identity: 87.1
  • Coverage: 575.0
  • Bit_score: 1001
  • Evalue 4.10e-289

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Taxonomy

Hyphomicrobium nitrativorans → Hyphomicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1725
CTGATCCCGTTCCTCGAGAACGACGACGCCAACCGCGCCCTCATGGGCTCGAACATGCAGCGTCAGGCCGTGCCGCTGCTCCGCGCCGAGGCGCCGCTCGTCGGCACCGGCATGGAGGAGGTCGTCGCACGTGACTCGGGCGCCGCGATCGCTGCACGCCGCACCGGCATCGTCGATCAGGTGGACGCGACGCGTATCGTCGTCCGCGCGACGGAGGAGACCGATCCTTCGAAGCCGGGCGTCGACATCTACCGCCTGCGCAAGTTCCAGCGCTCGAACCAGAACACCTGCATCAACCAGCGCCCGCTGGTGACGGTGGGTGATCACGTGAAGGCCGGCGAGATCATCGCCGATGGTCCCTCGACGGACCTCGGTGATCTCGCGCTCGGCAAGAACGTGCTCGTCGCGTTCATGCCGTGGATGGGCTACAACTTCGAGGACTCGATCCTGCTCTCGGAGCGCGTCGTCGCCGACGATATCTTCACCTCGATCCACATCGAGGAGTTCGAGCTCAGCGCCCGCGACACGAAGCTCGGCCCCGAGGAAATCACGCGCGACATTCCGAACGTTTCGGAAGAAGCGCTGAAGAACCTCGACGAAGCCGGCATCGTCTACATCGGTGCGGAGGTCCAGCCGGGCGACATCCTCGTCGGCAAGATCACGCCGAAGGGCGAGAGCCCGATGACGCCGGAAGAGAAGCTGCTCCGCGCCATCTTCGGCGAGAAGGCCTCCGACGTGCGCGACACGTCGCTGCGTCTGCCGCCGGGTGTTGCGGGCACGGTCGTCGAGGTGCGCGTCTTCAATCGCCATGGCGTCGAGAAGGACGAGCGCGCCATGGCGATCGAGCGCGAGGAGATCGAGCGTCTCGCCAAGGACCGCGACGACGAGCTCCAGATCCTCGACCGCAACGTCTACGGCCGTCTGCGCGAAGCGCTCATGGGCCGCGAGGTCTCCAAGGGGCCGAAGGGCGCGCGCAAGGGCACGGAGATCAACGACGAGATCCTCGGCGAGATCCCGCGCAGCCAGTGGTGGGAGATCGGCCTCAAGGACGAGAAGGCCATGGCCGCCGTCGAGGCCATCGGCAAGCAGTACGAGGACGCCAAGAAGAGCCTCGAGCGCCGCTTCGTCGACAAGGTCGAGAAGCTCCAGCGCGGTGACGAGCTGCCGCCCGGCGTGATGAAGATGGTCAAGGTCTTCGTCGCGGTGAAGCGGAAGATCCAGCCCGGCGACAAGATGGCCGGCCGTCACGGCAACAAGGGCGTCGTCTCGCAGATCGTGCCCGTCGAGGACATGCCGTTCCTCGAGGACGGCACGCACGTTGACGTGGTGCTGAATCCGCTCGGCGTGCCCTCGCGCATGAACGTCGGGCAGATCCTCGAGACGCATCTCGGCTGGGCTTGCCGCGGTCTCGGCCGTGCCATCGACGACGCGCTCGCGCAGTTCCATGCGAGCGGCGAAGCCGAGGCGCTGAGGAAGCAGATCACCTCCATCTACGGTGATGGCAATGGCCTCGGCAAGATGAAGGACGACGAGCTCGAGCAGCTTGGCGAGCAGCTCAAGACCGGCGTGCCGATCGCGACGCCCGTCTTCGACGGCGCGCGCGAGCCGGACATCGTCGAGATGCTGAAGAAGGCGGGCTTCGATACGTCGGGCCAGGTGACGCTTCGCGACGGTCGGACCGGCGATCCCTTCGATCGCAAGGTCACGGTCGGCTACAAGTACATC
PROTEIN sequence
Length: 575
LIPFLENDDANRALMGSNMQRQAVPLLRAEAPLVGTGMEEVVARDSGAAIAARRTGIVDQVDATRIVVRATEETDPSKPGVDIYRLRKFQRSNQNTCINQRPLVTVGDHVKAGEIIADGPSTDLGDLALGKNVLVAFMPWMGYNFEDSILLSERVVADDIFTSIHIEEFELSARDTKLGPEEITRDIPNVSEEALKNLDEAGIVYIGAEVQPGDILVGKITPKGESPMTPEEKLLRAIFGEKASDVRDTSLRLPPGVAGTVVEVRVFNRHGVEKDERAMAIEREEIERLAKDRDDELQILDRNVYGRLREALMGREVSKGPKGARKGTEINDEILGEIPRSQWWEIGLKDEKAMAAVEAIGKQYEDAKKSLERRFVDKVEKLQRGDELPPGVMKMVKVFVAVKRKIQPGDKMAGRHGNKGVVSQIVPVEDMPFLEDGTHVDVVLNPLGVPSRMNVGQILETHLGWACRGLGRAIDDALAQFHASGEAEALRKQITSIYGDGNGLGKMKDDELEQLGEQLKTGVPIATPVFDGAREPDIVEMLKKAGFDTSGQVTLRDGRTGDPFDRKVTVGYKYI