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SCNpilot_expt_500_bf_scaffold_25943_1

Organism: SCNpilot_expt_500_bf_step10_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 15 / 38 MC: 13
Location: comp(3..293)

Top 3 Functional Annotations

Value Algorithm Source
Putative HTH-type transcriptional regulator YdeL n=1 Tax=Sinorhizobium fredii USDA 257 RepID=I3X3X0_RHIFR similarity UNIREF
DB: UNIREF100
  • Identity: 52.1
  • Coverage: 96.0
  • Bit_score: 87
  • Evalue 1.00e-14
ydeL; HTH-type transcriptional regulator YdeL similarity KEGG
DB: KEGG
  • Identity: 52.1
  • Coverage: 96.0
  • Bit_score: 87
  • Evalue 3.10e-15
Putative HTH-type transcriptional regulator YdeL {ECO:0000313|EMBL:AFL50576.1}; TaxID=1185652 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium fredii USDA 257.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.1
  • Coverage: 96.0
  • Bit_score: 87
  • Evalue 1.40e-14

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Taxonomy

Sinorhizobium fredii → Sinorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 291
ATGGCAGGGTACTGGATTGCGCTATATATCCAGTTCATCGTTCTTTTGGTGGTCCAGTTACGGACACAGATCGCGAGCAAGGACGTGAACCGGCAGCGAAAGGCCCTGGCGAAGGGCATTTGCGACGATCTTCGAAGCCAGATCATGGCGGGGGTCTACAGGCCGGGCTCTGCGCTTCCGTCGACGCGGGCCTTGGCGGCCGAGCTCGGCGTCTCCCGGACGACCGTGACAGCGGCTTACGCCCAGCTTCTGGCCGAGGGCTTCCTGCAAAGTCGGCAGGGCGCGAAGACG
PROTEIN sequence
Length: 97
MAGYWIALYIQFIVLLVVQLRTQIASKDVNRQRKALAKGICDDLRSQIMAGVYRPGSALPSTRALAAELGVSRTTVTAAYAQLLAEGFLQSRQGAKT