ggKbase home page

SCNpilot_expt_500_bf_scaffold_33639_2

Organism: SCNpilot_expt_500_bf_step10_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 15 / 38 MC: 13
Location: comp(138..1010)

Top 3 Functional Annotations

Value Algorithm Source
Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DDI8_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 48.7
  • Coverage: 230.0
  • Bit_score: 207
  • Evalue 2.60e-50
Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain {ECO:0000313|EMBL:BAO80735.1}; TaxID=1458425 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae.;" source="Comamonadaceae bacterium A1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.1
  • Coverage: 222.0
  • Bit_score: 215
  • Evalue 1.30e-52
diguanylate cyclase/phosphodiesterase similarity KEGG
DB: KEGG
  • Identity: 46.5
  • Coverage: 230.0
  • Bit_score: 196
  • Evalue 8.50e-48

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Comamonadaceae bacterium A1 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 873
ATCGTTCCGCTGCGCCGTCCCGGCCGCGAGCACGTATCGATGGCCTACGAGGTGCTGCTGCGCGAGCGCGACGAGCACGGCGCATTCCTGCCGCCGGGGCGGTTGATCGCGGCTGCCGAGCGTCATGGCGCGATGCGGCGCATCGACTGGCACATGCTCGAAAGGACGCTGCAGCATCTGGACGAGAACCGCGAGCACGCGGCGGCGATCGACTTCGTTACCGTGAACCTGAGCGGCACTTCGCTGAACGACGAGCATTTCCTCGCCGACGCGCATACGCTGCTGCGCGACTGCCACGCCGTGGCGCCTCGCGTGTGCCTGGAGATCACCGAGTCGGTCGCGATGTTCGACGTGCGCAGCACGGGACGCTTCGTCGAGAAGATGCGTTCGCTCGGCGTGCGCATCGCGCTCGACGATTTCGGTGCCGGCTACTCGTCGTTCGCCTACCTGCGCGAGCTGCCCGCCACGCTGGTGAAGATCGACGGCCAGTTCATGCCGGGCATCGACGCGCAGCCGCGCAACCAGGTCATCGTCAGCGGCATCCGTCGGCTCACCGAGGAACTGGGCATGGCCTGCGTGGCCGAGTGGGTCGAGGACGTGGCGGCGCTCGCCTTCCTGCTGAGCGTGCGGATGGATTACGCGCAGGGCTTCGTTCTCGCGCGGCCCGCGCCGATCGAGCACTGGCTGCGCCATGCGGTGAACCTCGCCCCGCTCGTTGCCGCGCGCGAAATCACGGGCGCGGCGCTTTCGGCGCGAGCGCATGCGCCGGGCGGCGTCGAAGACCGCGTCGAGCGCTCGCCTGCGATCGACCTCCGCGTCGGTGCATCCGCTGCGGGGCCGACGGACATGCGCGAACCCCTGGCTTCGACATGA
PROTEIN sequence
Length: 291
IVPLRRPGREHVSMAYEVLLRERDEHGAFLPPGRLIAAAERHGAMRRIDWHMLERTLQHLDENREHAAAIDFVTVNLSGTSLNDEHFLADAHTLLRDCHAVAPRVCLEITESVAMFDVRSTGRFVEKMRSLGVRIALDDFGAGYSSFAYLRELPATLVKIDGQFMPGIDAQPRNQVIVSGIRRLTEELGMACVAEWVEDVAALAFLLSVRMDYAQGFVLARPAPIEHWLRHAVNLAPLVAAREITGAALSARAHAPGGVEDRVERSPAIDLRVGASAAGPTDMREPLAST*