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SCNpilot_expt_500_bf_scaffold_33697_1

Organism: SCNpilot_expt_500_bf_step10_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 15 / 38 MC: 13
Location: 2..760

Top 3 Functional Annotations

Value Algorithm Source
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00216361};; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.1
  • Coverage: 248.0
  • Bit_score: 294
  • Evalue 1.20e-76
aroE; shikimate 5-dehydrogenase (EC:1.1.1.25) similarity KEGG
DB: KEGG
  • Identity: 57.8
  • Coverage: 249.0
  • Bit_score: 291
  • Evalue 2.20e-76
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00036B452D similarity UNIREF
DB: UNIREF100
  • Identity: 60.8
  • Coverage: 250.0
  • Bit_score: 308
  • Evalue 7.20e-81
  • rbh

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Taxonomy

Hyphomicrobium nitrativorans → Hyphomicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 759
AAAGCCTACGGCATTGCCGGGCGCTACGACCGCGTCGCGGTCCCGCCGGGGGAAGCTGCAGCCTTCATTCATTCGCTTGAGGCGCGCGGTCTCGAAGGCTGCAACGTCACGGCACCCCACAAGCAGGCCGTCTTCGAGGCAGCGGACTGGCGAGATCCCTCCGCCGAGGCCGTCGGCGCAGCCAATACCGTGTGGTGCGAGGGCGGCAAGGTCTGCGTGGCCAATACGGACACCTACGGATTCATGACGCATCTCGCCCAGTCGGCCCCCGGCTGGGACAAGCGGGACGCGCCCGTCGCGCTCTTTGGCGCCGGTGGGGCGGCGCGCGCCATCGTCTATGGCTTCCTCGATGCCGGTGTGGAGCGGGTTCGCCTGATCAACCGGACGCCCGAGCGCGCCGAGGCGCTGGTCGCGCACTTCGGACCGCGCGTCGAGAGCTGTGCCTGGTCGGACCGCGCGCGGGGTGTCTCGGACGCCGGCGTCGTCGTCAACACGACAACGCTTGGAATGATCGGCAATGCGCCACTCGACCTCGATCTTTCCGCGCTCGATAGGGACGCGATCGTGGCCGATATCGTCTACGTGCCGCTGGAAACGCCGCTTCTTTCCGGGGCGCGGGCAAGAGGACATCGCACAGTGGATGGCCTGGGGATGTTGCTGCATCAGGCCGTGCCGGGTTTTGCGCGCTGGTTCGGCGTGCGGCCCGAGGTGACGCAGGCTCTGCGCGATATTCTCGTTGCCGACATAGAGAGGAAGTAA
PROTEIN sequence
Length: 253
KAYGIAGRYDRVAVPPGEAAAFIHSLEARGLEGCNVTAPHKQAVFEAADWRDPSAEAVGAANTVWCEGGKVCVANTDTYGFMTHLAQSAPGWDKRDAPVALFGAGGAARAIVYGFLDAGVERVRLINRTPERAEALVAHFGPRVESCAWSDRARGVSDAGVVVNTTTLGMIGNAPLDLDLSALDRDAIVADIVYVPLETPLLSGARARGHRTVDGLGMLLHQAVPGFARWFGVRPEVTQALRDILVADIERK*