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SCNpilot_expt_500_bf_scaffold_50_21

Organism: SCNPILOT_CONT_300_BF_Novosphingobium_63_714

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: 20928..22214

Top 3 Functional Annotations

Value Algorithm Source
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; Flags: Fragment;; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 42.0
  • Coverage: 436.0
  • Bit_score: 300
  • Evalue 2.70e-78
Putative two-component histidine kinase (Fragment) n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZXU3_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 42.0
  • Coverage: 436.0
  • Bit_score: 300
  • Evalue 1.90e-78
  • rbh
cpxA; Sensor protein cpxA similarity KEGG
DB: KEGG
  • Identity: 42.2
  • Coverage: 448.0
  • Bit_score: 300
  • Evalue 1.00e-78

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Taxonomy

Novosphingobium tardaugens → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1287
GTGAAGGGGCGGCTGTTCTGGAAGATCTTCACCGCCTTTTGCTGTGTGTTCTTTGCCCAGTTGGCAGGCCTTTGGACATTGTTCCTCGTTCTGGAACGCGATCATCCCTATTGGGCCGACAATCTGGAACGCTATGCCGCGCCCCGGCTGGAACAGATGGCCGCCGCAATCATCACGCATGAGGGGCCGCAGGCCATCCCGGCAGGCTTGCTGAACGGGCCGATGCCCACGCTGGTGATTGCGCCCGATGGGGTGCGGGCGCCCCAAGGCGTGCGCGCCACCACGGCGCAGGCCACCGCGCCCGATGGCCGCCGCTGGCGCATTTTCTATCGCCTGCCGCAAAGGTTCGACAAGGACCACTTTGCCCCGCCCCTGATCTTTTATATCAGCGGCGTCCTGTCCGGACTGATCTTTGCGGCCATTCTGGGGCTTTATCTCTCGCTGCCGATCCGGGCGCTGCGTGAGGGGCTCGACCGGTTTTCGCGCGGCGATCTGGGGGTGCGTCTGGCCGCGCGGATGGGGCGGCGGCGCGACGAAATCGCCGATCTGGCGCGCGATTTTGACGGCATGGCCGAAAAGGTCGAGCAACTGGTGCTTTCGCGCAGCCAGTTGATTGACGACATGTCGCATGAATTGCGCTCGCCGCTGGCCCGGCTGCAATTGGCCATCGCGCTGGCGCGGCAAAAGCCCGAAGGGGCGGTCACGGCGCTGGACCGGATCGAGCAGGAAGCGCGCCGTCTCGACGCCATGGCGGGCAGTCTGCTCACCCTCTCGCGGCTGGAAAGCGCCAGCGCCAGCCCGGAGCATTTCGTCCATCTGCGCGCGCTGATCGAGGATATTCTGGCCGATGTCCGCTTTGAGAGCGAGGCCAAGAATGTCCGCATCGACCTGTCGCGCCATGCCAGCATGCCCGAGGGTTTCCATGCCGATGTGACGGGCGACGCCGAATTGCTGCGCCGGGCGTTTGAAAATGTGTTGCGCAATGCGCTGCGCTTTTCGCCCGGAGACAGCACGATCGGCGTCACCCTGTCCGAGGAACCCGAGCGGATCGTCGTCACCATCGAGGACGAAGGCCCCGGCGTGGCCCCCGATCAGATCGACCGCCTGTTCGAACCCTTTCACCGGGGCGAAGGCGAGACGGGCGGATTTGGCCTTGGCCTGGCCATCGCGCAGCGGGCGGTGATCGTGCATGAAGGCACGATCACTGCCGAAAACCGCGCCAGAGGGGGCCTGCGGGTACGCATCACCCTGCCCGCGCGATGGGAGGAAGCCGCCGCGCTCAGTTAA
PROTEIN sequence
Length: 429
VKGRLFWKIFTAFCCVFFAQLAGLWTLFLVLERDHPYWADNLERYAAPRLEQMAAAIITHEGPQAIPAGLLNGPMPTLVIAPDGVRAPQGVRATTAQATAPDGRRWRIFYRLPQRFDKDHFAPPLIFYISGVLSGLIFAAILGLYLSLPIRALREGLDRFSRGDLGVRLAARMGRRRDEIADLARDFDGMAEKVEQLVLSRSQLIDDMSHELRSPLARLQLAIALARQKPEGAVTALDRIEQEARRLDAMAGSLLTLSRLESASASPEHFVHLRALIEDILADVRFESEAKNVRIDLSRHASMPEGFHADVTGDAELLRRAFENVLRNALRFSPGDSTIGVTLSEEPERIVVTIEDEGPGVAPDQIDRLFEPFHRGEGETGGFGLGLAIAQRAVIVHEGTITAENRARGGLRVRITLPARWEEAAALS*