ggKbase home page

SCNpilot_expt_500_bf_scaffold_419_12

Organism: SCNPILOT_CONT_300_BF_Novosphingobium_63_714

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(11494..14004)

Top 3 Functional Annotations

Value Algorithm Source
TonB-denpendent receptor n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B41E32 similarity UNIREF
DB: UNIREF100
  • Identity: 73.9
  • Coverage: 835.0
  • Bit_score: 1280
  • Evalue 0.0
  • rbh
TonB-dependent receptor {ECO:0000313|EMBL:ABP64313.1}; Flags: Precursor;; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.3
  • Coverage: 855.0
  • Bit_score: 1057
  • Evalue 0.0
TonB-dependent receptor similarity KEGG
DB: KEGG
  • Identity: 61.3
  • Coverage: 855.0
  • Bit_score: 1057
  • Evalue 0.0
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Novosphingobium aromaticivorans → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2511
ATGATCGGTATTCGGGGGCTTTACCTGTCTGGCGCCTGCGTTGCGATGATCGCAACCGCCACCACCGTCCATGCTCAAACCGAGCAGCCCAAAAAGGACGTTACCACAGGCGAAATCGTTGTCACCGCGCAATTCCGCAGCCAGAAGCTGCAGGACACGCCGCTGGCCATCACGGCCATGACCGGGGCCTCGCTGGCCGCGCGGGGACAGACCAATGTGGCCGAAGTGGCCGCGCAAACGCCCAATGTCACGCTGACCCCGCAAAACGCCTATCTCGGGCCGGGCATCATCGCCTTTATCCGCGGCGTGGGTCAGACAGACCCCAATTTCGCGCTCGAACCGGGCGTGGGCATGTATATCGATGACGTTTACCTGCCCACCCTCACCGGGTCGCTGCTCGACCTGATGGACCTTGACCGGGTTGAAGTGCTGCGCGGCCCGCAGGGCACGCTTTCCGGGCGCAACTCGCTGGGCGGCTCGATCAAGCTCTATTCGGTCAAGCCGCAGGGCAATGGCAAGGGCATGGTCGAAGGCACCTACGGCTCGTTCAACCGCATCGACATGCGCGGCTTTTTCGACCTGAAACTGGCCGACAATCTGTTCCTGCGCGTGTCGGGCGCGACCAAGAACCGCGATGGCTATGTCAAGCGGCTGGATTACGCCAAGACCCACCCCGGATCGAATGTGCCAACGCAGGCCACCGGCGACAGCCCGGTGCTGGGCACGCTGGGCGGCACCAGCTTTACCGCGGGCAAGGTCGCGCTGCGTTGGCAACCGGCCAGCAATGTCGAGGTCAATGTCTCGGGCGATTACACCCGCCAGCGCGACGAGCCGGGCGCCACCGTGCTGATCTATGGCAATTCCATCGCGCAATTCGCCGGTTCGCCCGTCAGCAAGTCGCCCGCCCGCCCATGGCTGCGCGGCACCAATGGCGCCCCGATTCCCTTGAACTGCGCCTTTGTCGCCAGCGGCGTGAACAGCTGCGACACGGTGCCCGCAGGCTATGACGGGCGCTATGTTTCCTATGCCACCTTCTTCGACAATGCCGCGTCCGACAGCCAGATGCCCTATAAGCCGCTGACGCTGAACCCGCATTCGAACCTCGACAATTATGGCTTTGCCGGGACCATCGACTGGACGATCGCCGAGGATCTGGCGCTCAAATCGATCAGCGCCTATCGCCATTACACCTCGTCATGGGCCTTTGCCGAAGGCGCCCCGGTCCAGCCCTCGATGCTGGAACAGGCGCAGGCCAATACCCAGTGGAGCGAGGAAATCCGCCTGTCCGGCAAGGCGCTCAACCGTCGTCTGGATTACACGGTTGGCGGCTTCTATTTCCACGCCAAGGGCACCTATACCGGGCGCATCGACCTCAACTATGCGGGCATCGACTTCCTGCACGGGCCGGACACGACGCCTGCCACCAACAAGGCGGTTTTCGCCAATGTCTCGGGCAAGCTGACCGAGGCGCTGACCATCACGGGCGGCGTGCGCGCCAGTTGGGACACCAAGGATTACACCTATTCGCGGCATAATCCCGATGGTTCGACGATCCTGCCCTGCACCGGCTATCCCTTTACCGTGGGCCAGCCTGCGAATTGCGCGATTGCCGCTCTGAACGGCCTCAACGCCCATTTCGAAAAGCAGCGCACCGACTGGCGCATCGCGGGCGACTATCGCTTCAGCCCCGAACTGATGGTCTATGCCCAGGTTTCGACCGGCTATCGCGCGGGCGGCGTCAATCCGCGCCCCTTCTATATCAACCAGGCCCAGTCCTTCCAGCCCGAGACCATCGTAGCCTATGAGGCGGGCTTCAAGTCCGACCTGTTCGATCGCAAGCTGCGCTTCAACGTGTCGGCCTTCTATAATGATTACAAGAACATCATCCTGACCGTTCTGAATTGCCCCAACAATCTGGGCTTCCCCTCGACGCCTTGCCTGCAACCAAAGAATGTCGGCTCGGCCCATGTGAAGGGCATTGAAATCGAGACGATGATCCGCCCGACCGCCGGGCTGACCTTCGATGCATCGCTGTCCTATCTCGATTTCAAATATACCACCGTGGACACGGCCAGCACCGGCGTGACCGCCAGCATGGTTCCGCCCTACACGCCCCAGTGGAAGTGGAACGCGGGCGTGCAATATGACATCCCCGATGTCCTGAAGGGCACGCTGTCGCTGCGCGCCGATGGCAATTACCAGTCGCACATCTATGTCGACCCCACCAATGTCGACAGCGCCGTGGTTTCCACCAGCACGGCCACCAATGGCGGCGGCGGATCGCTGGCCACGCAGGTGGCGACCAACCGGATCAACGGCTATTTCCTGGGCAATGGCCGGATCACATGGAAGAGCGCCGCCGATGGCTGGACCGCCAGCGTCGAGGTGCGCAACATCTTCAACAAATACTACTTCACCTCGATGACCGCGAATTACGTGTCGATCGGCACCGTGTCGGGCGCGCCCGGCCTGCCGCGGACATGGGCGGTGACGCTGAAGAAGGACTTCTAA
PROTEIN sequence
Length: 837
MIGIRGLYLSGACVAMIATATTVHAQTEQPKKDVTTGEIVVTAQFRSQKLQDTPLAITAMTGASLAARGQTNVAEVAAQTPNVTLTPQNAYLGPGIIAFIRGVGQTDPNFALEPGVGMYIDDVYLPTLTGSLLDLMDLDRVEVLRGPQGTLSGRNSLGGSIKLYSVKPQGNGKGMVEGTYGSFNRIDMRGFFDLKLADNLFLRVSGATKNRDGYVKRLDYAKTHPGSNVPTQATGDSPVLGTLGGTSFTAGKVALRWQPASNVEVNVSGDYTRQRDEPGATVLIYGNSIAQFAGSPVSKSPARPWLRGTNGAPIPLNCAFVASGVNSCDTVPAGYDGRYVSYATFFDNAASDSQMPYKPLTLNPHSNLDNYGFAGTIDWTIAEDLALKSISAYRHYTSSWAFAEGAPVQPSMLEQAQANTQWSEEIRLSGKALNRRLDYTVGGFYFHAKGTYTGRIDLNYAGIDFLHGPDTTPATNKAVFANVSGKLTEALTITGGVRASWDTKDYTYSRHNPDGSTILPCTGYPFTVGQPANCAIAALNGLNAHFEKQRTDWRIAGDYRFSPELMVYAQVSTGYRAGGVNPRPFYINQAQSFQPETIVAYEAGFKSDLFDRKLRFNVSAFYNDYKNIILTVLNCPNNLGFPSTPCLQPKNVGSAHVKGIEIETMIRPTAGLTFDASLSYLDFKYTTVDTASTGVTASMVPPYTPQWKWNAGVQYDIPDVLKGTLSLRADGNYQSHIYVDPTNVDSAVVSTSTATNGGGGSLATQVATNRINGYFLGNGRITWKSAADGWTASVEVRNIFNKYYFTSMTANYVSIGTVSGAPGLPRTWAVTLKKDF*