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SCNpilot_expt_500_bf_scaffold_20902_3

Organism: SCNPILOT_CONT_300_BF_Novosphingobium_63_714

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(1104..1691)

Top 3 Functional Annotations

Value Algorithm Source
ATP-dependent helicase Lhr and Lhr-like helicase {ECO:0000313|EMBL:CCA92395.1}; EC=3.6.1.- {ECO:0000313|EMBL:CCA92395.1};; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. PP1Y.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.4
  • Coverage: 185.0
  • Bit_score: 204
  • Evalue 1.60e-49
DEAD/DEAH box helicase domain protein n=1 Tax=Zymomonas mobilis subsp. mobilis ATCC 29191 RepID=I6YVS0_ZYMMB similarity UNIREF
DB: UNIREF100
  • Identity: 55.4
  • Coverage: 195.0
  • Bit_score: 210
  • Evalue 1.20e-51
DEAD/DEAH box helicase similarity KEGG
DB: KEGG
  • Identity: 55.4
  • Coverage: 195.0
  • Bit_score: 210
  • Evalue 3.80e-52

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Taxonomy

Novosphingobium sp. PP1Y → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 588
GTCCAAGAGGTAGATGATCGTGCCAAGGTCATTCTTGTCACGCCCGCCAAGGCCGGCACCCCACCGATTTTTGGCGGTGATGCCGGCATCATCCATGACGTCGTGATTGAAAGGATGTTTTCGGTCCTAAAGCGGAATGACAGCCCCACCTATATGGACGCTACGGCCCGGGACCTACTGTCGGAAGCGCGCTCAAACTTCGCCCAGATGCACTTCTCTCATGGAAGGATCGCACAAATCGGCGAAGGAGAATGGATCGTCGCTACCGGCCGCGGTACGGTCAAAACAACCACCCTCGCCTTTGCGTTGAGGGCGCGGGGCTTTACCGTCCAAATCTTCGATGGCTTTCTTGAGGTTTTGATCGCGAAGAGCACGCAGCCTCTGGAAGCTGCACTGAAAGACCTCGCAGACGGTGCCGATGCCAAGCTGTTTGCGGGTAATGCAAATTTGATGACGGAAAAATTCCACCCCTATCTTTCAAAAGCGTTGCTCGAGATCGACGTATTGGCGGTTCGTCTCGATGAAAACAGTTTGCCTGCGCTTGCAGAGAATATTCTTTCTGATAGCGCACTGGTTCAAGGGATCTGA
PROTEIN sequence
Length: 196
VQEVDDRAKVILVTPAKAGTPPIFGGDAGIIHDVVIERMFSVLKRNDSPTYMDATARDLLSEARSNFAQMHFSHGRIAQIGEGEWIVATGRGTVKTTTLAFALRARGFTVQIFDGFLEVLIAKSTQPLEAALKDLADGADAKLFAGNANLMTEKFHPYLSKALLEIDVLAVRLDENSLPALAENILSDSALVQGI*