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SCNpilot_expt_500_bf_scaffold_117_5

Organism: SCNPILOT_EXPT_1000_BF_Xanthomonadales_66_270

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38 MC: 1
Location: 5720..6403

Top 3 Functional Annotations

Value Algorithm Source
LuxR family two component transcriptional regulator n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WBU9_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 70.3
  • Coverage: 222.0
  • Bit_score: 303
  • Evalue 1.60e-79
LuxR family two component transcriptional regulator {ECO:0000313|EMBL:EIL96940.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.3
  • Coverage: 222.0
  • Bit_score: 303
  • Evalue 2.20e-79
response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain similarity KEGG
DB: KEGG
  • Identity: 68.5
  • Coverage: 222.0
  • Bit_score: 294
  • Evalue 4.00e-77

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 684
ATGCTCGGGCGCATGTCCGAGATCCTCATCGCCGACGACCATCCGCTGTACCGCGACGCGCTGCGCCGCGCCCTGAACCAGGCGGCGCCCGGCACCAGCCTGTTCGAGGCGTCCACCGTGCCGGAGCTGCTGAGCCTGGTGGAAGCGCATCCGGAAGCCGAGCTGCTGCTGCTGGATCTGCACATGCCCGGCGCGCGCGGCTTCTCGGCGCTGGCTCACCTGCGCGGCCAGCATCCGGGCCTGCCGGTCATCGTCGTATCGGCGCACGAGGAAGGCAGCGTCGCGCGGCGCGCTCTGGCCCATGGCGCGGCCGGCTACATCCCGAAGTCCAGCTCGGCCGACACCATCGTCGACGCGATACGCCACGTGCGCGAAGGCGAGATCTGGCTGCCGGTGGCCATGGGCGCGAGCACCACACCGCTGCAGGACGACGAGGCGCAGATCGCCGCGCGCGTCGCCGAGCTGACGCCGCAACAGTTCCGCGTGCTTGCGATGATTGCCGAGGGCCTGCTCAACAAGCAGATCGCCTACGAACTCGGCGTATCGGAAGCGACCGTCAAGGCGCACATGACCGCGATCATGCGCAAACTCGGCTGCAACAATCGCACCCAGGTCGCGCTCGCGGCCAGCCAGCTCGCGCTGGACCCGAACACGGCGCTGCCGTTGGTCGACGACGAGGCCTGA
PROTEIN sequence
Length: 228
MLGRMSEILIADDHPLYRDALRRALNQAAPGTSLFEASTVPELLSLVEAHPEAELLLLDLHMPGARGFSALAHLRGQHPGLPVIVVSAHEEGSVARRALAHGAAGYIPKSSSADTIVDAIRHVREGEIWLPVAMGASTTPLQDDEAQIAARVAELTPQQFRVLAMIAEGLLNKQIAYELGVSEATVKAHMTAIMRKLGCNNRTQVALAASQLALDPNTALPLVDDEA*