ggKbase home page

SCNpilot_expt_500_bf_scaffold_117_15

Organism: SCNPILOT_EXPT_1000_BF_Xanthomonadales_66_270

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38 MC: 1
Location: comp(18295..18693)

Top 3 Functional Annotations

Value Algorithm Source
biopolymer transporter ExbD n=1 Tax=Methylobacter sp. UW 659-2-H10 RepID=UPI000361A504 similarity UNIREF
DB: UNIREF100
  • Identity: 42.3
  • Coverage: 123.0
  • Bit_score: 91
  • Evalue 7.30e-16
exbD; biopolymer transport ExbD/TolR protein; K03559 biopolymer transport protein ExbD similarity KEGG
DB: KEGG
  • Identity: 40.2
  • Coverage: 122.0
  • Bit_score: 89
  • Evalue 1.10e-15
Biopolymer transporter ExbD {ECO:0000313|EMBL:AIF48766.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 41.0
  • Coverage: 134.0
  • Bit_score: 89
  • Evalue 3.90e-15

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Dyella japonica → Dyella → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 399
ATGTCCGCCCTGTCCGTGCGCTCCACCGAACGGCCGCTGGCCGAGATCAACATCACTCCGTTGATCGACGTGATGCTCGCCCTGCTGCTGATTTTCATGATCTCGGCGCCGCTGCTGACCGACAAGATCCCGTTGCCGCTGGGCGGTCGTCCAGGTACGGCGATGTCGCGCACGGTTGACCTGCGCATCGCCGCCGACGGGCAAGTGATCTACAACGACGCGGTGCTGAGTCGCATCGAGCTCGAAGCGCAGCTGCTCAGCTGGGCCGGCCAGGGCGACAACAAACCGGTGCTGCAGCTGCATCCGGACAAGGCGACCACGCACCAGAACCTGATCGACGTGCTGTCGCTGGCGCGGCAGACCGGCATGGACGGCATTTCGATCGAGACGCCGCGCTGA
PROTEIN sequence
Length: 133
MSALSVRSTERPLAEINITPLIDVMLALLLIFMISAPLLTDKIPLPLGGRPGTAMSRTVDLRIAADGQVIYNDAVLSRIELEAQLLSWAGQGDNKPVLQLHPDKATTHQNLIDVLSLARQTGMDGISIETPR*