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SCNpilot_expt_500_bf_scaffold_254_7

Organism: SCNPILOT_EXPT_1000_BF_Burkholderiales_68_66

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 8375..8995

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, TetR family n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HWW0_PARL1 similarity UNIREF
DB: UNIREF100
  • Identity: 49.0
  • Coverage: 194.0
  • Bit_score: 200
  • Evalue 1.70e-48
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 49.0
  • Coverage: 194.0
  • Bit_score: 200
  • Evalue 5.40e-49
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ABS64393.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.0
  • Coverage: 194.0
  • Bit_score: 200
  • Evalue 2.40e-48

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Taxonomy

Parvibaculum lavamentivorans → Parvibaculum → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 621
ATGGCCCGTACCGCCGGATCCGAGGGCAGCCGCACCGAGGAGTCCATCCGCCGCGCCGCCATCGGCCTGATCGCCGAGCGCGGCTTCGAGGCGATGACGCTGCGCGAGCTCGCGCGCCGCGTCGGCGTGCAGCCGGGCACCCTGTACCGCTATTTCCCGAGCAAGGGGCGCATGCTGGTCGAGCTGCTGCTCGAGCACCTGGAGTTCCTGCTCGGGCAGTGGGAGCGCACGCAGCCTGCCGGCGCCGATCCGCTCGAGCGCCTGCGCGCCTTCGTCGACTTCCACATCCGCGCCCACACGCTGCGCCGGCGCGAGGTGTTCGTCGCCAACATGGAGCTGCGCAGCCTCGCACCGGCCGATCGCCGCCGCGTGGTCGCGCTGCGGCGCCGCTACGAGGACATCCTCGCCGGCATCCTGCACGCCGGCGTCGCCGCGCGGGTGTTCAGGGTGCCGGACGTGCGCGTGGCCACGTTCGCAGTGCTCGCCATGCTCACCGGCGTCGGCGCCTGGTATCGCGAGAGCGGGCGGCTCGGCAAGCGCGAGCTGATCGACGTGCATACGCAGCTGGTGATGCAGTGCGTGGGCGCGGCGCCTCCGGACCACGACGGGAGATCCCCTTGA
PROTEIN sequence
Length: 207
MARTAGSEGSRTEESIRRAAIGLIAERGFEAMTLRELARRVGVQPGTLYRYFPSKGRMLVELLLEHLEFLLGQWERTQPAGADPLERLRAFVDFHIRAHTLRRREVFVANMELRSLAPADRRRVVALRRRYEDILAGILHAGVAARVFRVPDVRVATFAVLAMLTGVGAWYRESGRLGKRELIDVHTQLVMQCVGAAPPDHDGRSP*