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SCNpilot_expt_500_bf_scaffold_144_3

Organism: SCNPILOT_EXPT_300_BF_Nitrosospira_56_20

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: 3711..4274

Top 3 Functional Annotations

Value Algorithm Source
Negative regulator of AmpC, AmpD n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y812_NITMU similarity UNIREF
DB: UNIREF100
  • Identity: 70.3
  • Coverage: 175.0
  • Bit_score: 270
  • Evalue 1.60e-69
N-acetyl-anhydromuranmyl-L-alanine amidase {ECO:0000313|EMBL:KIO49780.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.0
  • Coverage: 179.0
  • Bit_score: 294
  • Evalue 8.60e-77
N-acetyl-anhydromuranmyl-L-alanine amidase; K03806 AmpD protein similarity KEGG
DB: KEGG
  • Identity: 70.3
  • Coverage: 175.0
  • Bit_score: 270
  • Evalue 5.10e-70

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Taxonomy

Nitrosospira sp. NpAV → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 564
ATGGTCAATGAAGGCGCAATTTATGGCGATGCGGATAGCTGGCTGAACAGCATACGCTTCATTCCTTCCCCGAATTGCGACGAACGGCCACCCGGCTGTTCTGTAAGCCTGCTGGTCATCCACAGCATCAGCCTTCCGCCCGGCGAGTTCGGCGGCAATGGCGTGATCGAGCTATTCACCAACCGGCTGGATCATGATGAGCATCCCTATTACCGGAATCTCCGGGATCTCAAGGTTTCCGCGCATTTCTTCATTCGGCGGGACGGAGAAACCATTCAATTCGTACCGTGCGAAAAACGGGCCTGGCATGCAGGGGTCTCCTCCTGGCAGGGCAGGGACCGCTGCAACGACTATTCCATCGGGATAGAGCTCGAGGGCGGCGATACCCAGCCCTTTACCGGCGCGCAATACGAGGCATTGATTTCCTTGACTACGACGCTGCATAAAACCTACCCCATTACGGATATCGCCGGGCATGCCGATATCGCGCCCGGACGCAAGACCGACCCCGGCCCCTGTTTTGATTGGGAGCGCTACCGTAAGGGGTGTGCTCACCCCGCTTGA
PROTEIN sequence
Length: 188
MVNEGAIYGDADSWLNSIRFIPSPNCDERPPGCSVSLLVIHSISLPPGEFGGNGVIELFTNRLDHDEHPYYRNLRDLKVSAHFFIRRDGETIQFVPCEKRAWHAGVSSWQGRDRCNDYSIGIELEGGDTQPFTGAQYEALISLTTTLHKTYPITDIAGHADIAPGRKTDPGPCFDWERYRKGCAHPA*