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SCNpilot_expt_500_bf_scaffold_521_22

Organism: SCNPILOT_EXPT_300_BF_Nitrosospira_56_20

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: comp(19635..20330)

Top 3 Functional Annotations

Value Algorithm Source
Succinate dehydrogenase iron-sulfur subunit {ECO:0000256|RuleBase:RU361237}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU361237};; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.5
  • Coverage: 231.0
  • Bit_score: 462
  • Evalue 2.90e-127
sdhB; succinate dehydrogenase iron-sulfur subunit (EC:1.3.99.1); K00240 succinate dehydrogenase iron-sulfur subunit [EC:1.3.99.1] similarity KEGG
DB: KEGG
  • Identity: 89.6
  • Coverage: 231.0
  • Bit_score: 446
  • Evalue 6.40e-123
  • rbh
Succinate dehydrogenase iron-sulfur protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJ62_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 93.5
  • Coverage: 231.0
  • Bit_score: 459
  • Evalue 2.30e-126
  • rbh

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Taxonomy

Nitrosospira sp. NpAV → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 696
ATGAGATTCTCCATTTTCCGCTTTGATCCGGACAAGGATGCAAAGCCATACATGCAGCAGTATGACATCGCGCTGGAACCGGCGGACCGGATGCTGCTGGACGCCCTGGTGCGCATCAAGGCGGTGGATGACAGCCTGAGTCTTCGCCGTTCCTGCAGGGAAGGCGTATGCGGTTCGGACGGAATGAATATCAATGGGCGCAATGGACTGGCCTGCATCACGCCGATAGCGGGGCTGCGCGAACCGATAGAATTGCGCCCGCTGCCGGGATTGCCGGTAATACGGGATCTTATCGTCGATATGACGCAGTTCTTCAAGCAATATCATTCGATCAAGCCCTATCTCATCAACAATGATCCGCCACCCGAAACCGAACGGTTGCAATCGCCGCAGGAACGCGCGGAACTGGACGGACTGTACGAATGTATCCTGTGCGCATGCTGCTCCACCGCCTGTCCGTCATTCTGGTGGAATCCCGATAAATTCGTCGGTCCTGCCGGATTATTGCAGGCATACCGTTTTCTGGCGGACAGCCGCGACCAGGCTACCGAGGAAAGACTGGATTATCTTGAAGACCCGTATCGGTTGTTCCGCTGCCATTCCATCATGAATTGCGTCGATGTATGCCCAAAGGAATTGAATCCCAACCGGGCGATCAGCAAAATCAAGGATATGATGGTCAAAAGGACGGTATGA
PROTEIN sequence
Length: 232
MRFSIFRFDPDKDAKPYMQQYDIALEPADRMLLDALVRIKAVDDSLSLRRSCREGVCGSDGMNINGRNGLACITPIAGLREPIELRPLPGLPVIRDLIVDMTQFFKQYHSIKPYLINNDPPPETERLQSPQERAELDGLYECILCACCSTACPSFWWNPDKFVGPAGLLQAYRFLADSRDQATEERLDYLEDPYRLFRCHSIMNCVDVCPKELNPNRAISKIKDMMVKRTV*