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SCNpilot_expt_500_bf_scaffold_206_28

Organism: SCNPILOT_EXPT_300_BF_Thiobacillus_SCN2_64_69

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 MC: 3 ASCG 12 / 38
Location: 33159..34502

Top 3 Functional Annotations

Value Algorithm Source
signal recognition particle subunit FFH/SRP54 (srp54); K03106 signal recognition particle subunit SRP54 id=12496530 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 448.0
  • Bit_score: 851
  • Evalue 4.00e-244
  • rbh
signal recognition particle subunit FFH/SRP54 (srp54); K03106 signal recognition particle subunit SRP54 similarity KEGG
DB: KEGG
  • Identity: 91.7
  • Coverage: 447.0
  • Bit_score: 796
  • Evalue 4.90e-228
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.7
  • Coverage: 447.0
  • Bit_score: 796
  • Evalue 2.20e-227

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Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1344
ATGCTAGAAAACCTCAGCGGACGCCTCGCCGGTGTCGTCAAAACCCTTCGCGGGCAGGCCCGCATCACCGAAGCCAACGTCCAGGACACGCTTCGCCAGGTGCGGCTGGCCCTGCTGGAGGCCGATGTCGCCCTGCCGGTGGTCAAACGCTTCATCGAATCGGTGAAGGTACGCGCTCTGGGGCAGGAAGTGCTGGCCAGCCTCACGCCCGGGCAGGCCCTGATCGGTATCGTTCACGAAGAACTCACCCGCCTCATGGGCGGCGACAACGCCGATCTCGATCTCGCCGCCACGCCGCCGGCCGTGATCCTCATGGCCGGCCTCCAGGGCTCGGGCAAGACGACAACCTCGGGCAAGCTCGCGCTGCTGCTGAAGAACCGCAAGAAAAAAGTATTGCTCGCCTCGGCCGACGTCTACCGTCCGGCGGCCATCGACCAGCTCCGCCAGCTCGGCAGGCAGCTCGACGTGGCTTTCTTCGAAGCCGGCGACGAACGCGATCCGCTGAAGATCGCCCGGGCCGCACAGGATTATGCGCGCCGCCAGTTCTTCGATGTGTTGATCGTCGATACCGCGGGCCGGCTGGCCATCGACGAAGCGATGATGAACGAGATCAAGGCCCTGCACGCCGCGATCGCGCCGGTCGAAACCTTGTTCGTCGTCGATGCCATGCAGGGACAGGACGCAGTCAACGTCGCGCGCGCCTTCAACGAGGCACTGCCGCTGACCGGCGTCGTACTGACCAAGCTCGACGGCGACGCACGCGGCGGCGCGGCCCTGTCGGTACGCGAAATCACCGGCAAACCGCTCAAGTTCATCGGCGTCGGCGAAAAGCCGAACGGCCTGGAGCCGTTCCATCCGGAACGCATGGCCCAGCGCATTCTCGGCATGGGCGATGTGCTCTCGCTGATCGAGCAGGCCCAGGGGGCAGTCGACATCGCCGAAGCCAAGAAACTGGCTGACAAGGTCAAGAAAGGCAAGGATTTCGACCTCGAAGACTTCAAGGCACAGATTCAGCAGATGCGGAAAATGGGCGGGCTCTCGGCCCTGATGGACAAGCTGCCGGGAGCCGCCAACATGGCGTTGCCCGCCGGCGCCGATGAAAAGGCGATCAACCGTGTCGAAGGCATCATCAATAGCATGACCCCGCAGGAACGCCGCAAACCCGAGATCATCAAGGCCAGCCGCAAACGGCGCATCGCGGCCGGTGCCGGCGTGCAGGTCCAGGACGTCAACAAACTGCTCAACCAGTTCGAGCAGGCACAGAAAATGATGAAAATGATGGGCAAGGGCGGCCTGGGCAAGATGATGCGCGGGATGAAAGGCATGCTGCCCGGCATGCGCTGA
PROTEIN sequence
Length: 448
MLENLSGRLAGVVKTLRGQARITEANVQDTLRQVRLALLEADVALPVVKRFIESVKVRALGQEVLASLTPGQALIGIVHEELTRLMGGDNADLDLAATPPAVILMAGLQGSGKTTTSGKLALLLKNRKKKVLLASADVYRPAAIDQLRQLGRQLDVAFFEAGDERDPLKIARAAQDYARRQFFDVLIVDTAGRLAIDEAMMNEIKALHAAIAPVETLFVVDAMQGQDAVNVARAFNEALPLTGVVLTKLDGDARGGAALSVREITGKPLKFIGVGEKPNGLEPFHPERMAQRILGMGDVLSLIEQAQGAVDIAEAKKLADKVKKGKDFDLEDFKAQIQQMRKMGGLSALMDKLPGAANMALPAGADEKAINRVEGIINSMTPQERRKPEIIKASRKRRIAAGAGVQVQDVNKLLNQFEQAQKMMKMMGKGGLGKMMRGMKGMLPGMR*