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SCNpilot_expt_500_bf_scaffold_206_33

Organism: SCNPILOT_EXPT_300_BF_Thiobacillus_SCN2_64_69

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 MC: 3 ASCG 12 / 38
Location: 36686..37273

Top 3 Functional Annotations

Value Algorithm Source
TetR family transcriptional regulator id=12496525 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 196.0
  • Bit_score: 398
  • Evalue 4.10e-108
  • rbh
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 58.7
  • Coverage: 189.0
  • Bit_score: 227
  • Evalue 3.00e-57
Possible Transcriptional Regulator, TetR family {ECO:0000313|EMBL:AAZ97937.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.7
  • Coverage: 189.0
  • Bit_score: 227
  • Evalue 1.30e-56

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Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 588
GTGACAACGATCTCACCGCAACGCGAAGTCACCCGGGATCTGGTCCTGGACGCGGCGCTCGCCCTGTTCACCGAAAAGGGATATTTCAACACCTCCGTGCATGACATCGGGCGCAAAGCGCATGTCAGCATCGGTTCGATCTATCACCATTTCGGCGACAAGGCCGGTCTGGCGCGCGCGCTCTATTCGGCACTGACCGCCCACATGGCGCAACGGATCGGCACGCTCGAACGTCAGCACGGTTCCTGTCACGATCAGGCGCGCGCGGTCGTCGCCGAGTTGTTCGATCTGACCGAGTCCGCTCCGCCCGTGATGAATTTCATGCTGTATGCCCGGCATCGTGAATTCCTGCCCGACGAACCGCCGGTCTGCTCTTCGCGCCCTTTCGCGATGATGCGCGAAATGGTGCGCCGCGGCATGGCAAGCGGCGAAATCCGCCGGATGGATCCGCTGATCGCTTCGACCTGCCTCTTCGGCGGCCCGCTCCGGATGATCACAGCGCGTCTTGACGCACTGCTGCCCCGCCCCCTGCCGGATTACCTGGACGATACTTGGACCTGCGCCTGGCGCGCGGTGGCCACGTCCTGA
PROTEIN sequence
Length: 196
VTTISPQREVTRDLVLDAALALFTEKGYFNTSVHDIGRKAHVSIGSIYHHFGDKAGLARALYSALTAHMAQRIGTLERQHGSCHDQARAVVAELFDLTESAPPVMNFMLYARHREFLPDEPPVCSSRPFAMMREMVRRGMASGEIRRMDPLIASTCLFGGPLRMITARLDALLPRPLPDYLDDTWTCAWRAVATS*