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SCNpilot_expt_500_bf_scaffold_511_9

Organism: SCNPILOT_EXPT_300_BF_Thiobacillus_SCN2_64_69

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 MC: 3 ASCG 12 / 38
Location: comp(8105..8431)

Top 3 Functional Annotations

Value Algorithm Source
nitrogen regulatory protein P-II id=12496247 bin=THIO_MID species=unknown genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 109.0
  • Bit_score: 217
  • Evalue 9.40e-54
Nitrogen regulatory protein P-II {ECO:0000313|EMBL:EXJ15180.1}; TaxID=1249627 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiorhodococcus.;" source="Thiorhodococcus sp. AK35.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.3
  • Coverage: 106.0
  • Bit_score: 174
  • Evalue 9.80e-41
nitrogen regulatory protein P-II similarity KEGG
DB: KEGG
  • Identity: 74.5
  • Coverage: 106.0
  • Bit_score: 164
  • Evalue 1.70e-38

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Taxonomy

Thiorhodococcus sp. AK35 → Thiorhodococcus → Chromatiales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 327
ATGACCACGCTCAAGTTCAGTCCGCTGAAAAAGCTCGAAATCATTCTCGATGGCGCGCATGTCGCATTCGCCACCGACCAGCTCGACCGCGCCGGGGTGACGGGCTACACGCTCATCCACAATCTTTCGGGGAAAGGCAGCCAGGGGTTCCACGAGGGACACCTGATGTTCAACGAGGACGACGTGCTGGTGATGGTCATCGCGGCAGTGCCTGCGGAACTCGTGACGCCGCTCCTGGAAGGATTCGCTCCGTTCTTCGCGGAGCATTCCGGCGTGGTGTTCGTGACCGATATTCAGGTGGTGCGGCCCGAGAAATTCACGGCTTGA
PROTEIN sequence
Length: 109
MTTLKFSPLKKLEIILDGAHVAFATDQLDRAGVTGYTLIHNLSGKGSQGFHEGHLMFNEDDVLVMVIAAVPAELVTPLLEGFAPFFAEHSGVVFVTDIQVVRPEKFTA*