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SCNpilot_expt_500_bf_scaffold_910_20

Organism: scnpilot_expt_500_bf_thiobacillus1

near complete RP 49 / 55 MC: 4 BSCG 49 / 51 MC: 7 ASCG 12 / 38 MC: 2
Location: 13841..15640

Top 3 Functional Annotations

Value Algorithm Source
Elongation factor 4 {ECO:0000255|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000255|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000255|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000255|HAMAP-Rule:MF_00071}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.7
  • Coverage: 599.0
  • Bit_score: 1133
  • Evalue 0.0
elongation factor 4 n=1 Tax=Thiobacillus thioparus RepID=UPI000375E13F similarity UNIREF
DB: UNIREF100
  • Identity: 97.2
  • Coverage: 599.0
  • Bit_score: 1138
  • Evalue 0.0
  • rbh
GTP-binding protein LepA; K03596 GTP-binding protein LepA similarity KEGG
DB: KEGG
  • Identity: 96.7
  • Coverage: 599.0
  • Bit_score: 1133
  • Evalue 0.0
  • rbh

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Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1800
GTGTCCCAGAATCTGATCCGCAATTTTTCCATCATTGCCCATATCGACCACGGCAAGTCCACGCTGGCGGACCGCCTGATCCAGTTTTGCGGCGGCCTGTCCGAGCGCGAGATGGAGGCGCAGGTGCTCGATTCCATGGATCTGGAGAAGGAACGCGGCATCACCATCAAGGCGCAGACCGCTGCGCTGACCTACAAGGCGCAGGATGGCCAGGTTTACCGCCTGAACCTGATCGACACCCCGGGCCACGTCGATTTTTCCTACGAAGTCAGCCGCTCGCTGTCCGCCTGCGAGGGTGCGCTGCTGGTGGTCGACGCCTCGCAGGGCGTCGAGGCGCAGACCGTGGCCAACTGCTACACCGCGATCGACCTTGGCGTCGAGGTGATCCCTGTGCTGAACAAGATCGACCTGCCAGCCGCCGATCCCGACCGGGTGGCGGAAGAGATCGAGGATATCGTCGGCCTCGACGCCACCGACGCGGTGCGTGCCTCGGCCAAGACCGGCATCGGCATTTCCGAAATCCTCGAGGTGGTGGTGAAGCAGGTGCCACCGCCGCGCGGAGACGAGTCTGCGCCGCTGAAGGCGCTGATCATCGATTCGTGGTTCGACAACTACGTCGGCGTGGTGATGCTGGTGCGTGTGGTCGACGGCGTGCTACGCCCGAAGGACAAGATCCGCTTCATGGCGAGCGGTGCGCAACATCTGACCGAACACGTCGGCGTGTTCACGCCCAAGTCGGTCGACAAGCCCCAGCTTTCGGCGGGTGAAGTCGGTTTCGTGATCGCCGGCATCAAGGAGCTCAAATCCGCCCAGGTGGGAGACACCATCACGCTGATCGACCGTCCCGCCAGCGAACCCCTGCCGGGTTTCAAGAAGGTGCAGTCGCAGGTGTTTGCCGGCTTGTATCCGGTTGAATCCCACGACTTCGAGGCGCTGCGCGACGCATTGACCAAGCTGCAGCTGAACGATGCCGCGCTGCAGTTCGAGCCCGAGGTGTCGCAGGCGCTGGGATTCGGCTTCCGCTGTGGCTTCCTCGGCCTGTTGCACATGGATATCGTGCAGGAACGGCTCGAGCGTGAGTACGACATGGATCTCATCACCACCGCGCCGACGGTGGTGTATGAAGTGGTGCTGAAGGATGGCACCACCATCAACGTCGAGAACCCGTCCAAGCTGCCCGAGCCGTCCAAGATCGAGGAAATCCGCGAACCCATCATTACCGCGACCATCTTCGTGCCGGAGGAATTCGTCGGCAACGTCATCACCCTGTGCAACCAGAAGCGCGGCATGCAGCTCGACATGCAGTACCACGGCAAGCAGGTCATGTTGCGCTACGACCTGCCCATGAACGAAGTGGTGATGGACTTCTTCGACAAGCTGAAATCGACCAGCCGCGGCTATGCCTCGCTCGACTATGAATTCAAGGAATTCCGCGCCGGCGATCTGGTCAAGCTCGACATCCTGGTCAACAACGAGAAAGTCGATGCGCTGTCCCTCATCGTGCACCGTGCCACCAGTGTGTACCGCGGGCGCGAGCTCGCCGCCAAGATGCGCGAACTGATCCCGCGCCAGATGTTCGACGTCGCCGTACAGGCGGCGATCGGCGCCAATATCATTGCGCGTGAGAATGTGAAAGCCATGCGCAAGAACGTGCTCGCCAAGTGTTACGGCGGCGACATCACGCGCAAGAAGAAGCTCCTGGAAAAGCAGAAGGCCGGCAAACGCCGCATGAAGCAGGTCGGCAACGTGGAAATCCCGCAGGAAGCCTTTCTTGCGATCCTCCAGGTCTCCGATAAATAA
PROTEIN sequence
Length: 600
VSQNLIRNFSIIAHIDHGKSTLADRLIQFCGGLSEREMEAQVLDSMDLEKERGITIKAQTAALTYKAQDGQVYRLNLIDTPGHVDFSYEVSRSLSACEGALLVVDASQGVEAQTVANCYTAIDLGVEVIPVLNKIDLPAADPDRVAEEIEDIVGLDATDAVRASAKTGIGISEILEVVVKQVPPPRGDESAPLKALIIDSWFDNYVGVVMLVRVVDGVLRPKDKIRFMASGAQHLTEHVGVFTPKSVDKPQLSAGEVGFVIAGIKELKSAQVGDTITLIDRPASEPLPGFKKVQSQVFAGLYPVESHDFEALRDALTKLQLNDAALQFEPEVSQALGFGFRCGFLGLLHMDIVQERLEREYDMDLITTAPTVVYEVVLKDGTTINVENPSKLPEPSKIEEIREPIITATIFVPEEFVGNVITLCNQKRGMQLDMQYHGKQVMLRYDLPMNEVVMDFFDKLKSTSRGYASLDYEFKEFRAGDLVKLDILVNNEKVDALSLIVHRATSVYRGRELAAKMRELIPRQMFDVAVQAAIGANIIARENVKAMRKNVLAKCYGGDITRKKKLLEKQKAGKRRMKQVGNVEIPQEAFLAILQVSDK*