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SCNpilot_expt_500_bf_scaffold_910_30

Organism: scnpilot_expt_500_bf_thiobacillus1

near complete RP 49 / 55 MC: 4 BSCG 49 / 51 MC: 7 ASCG 12 / 38 MC: 2
Location: comp(22902..24671)

Top 3 Functional Annotations

Value Algorithm Source
preprotein translocase subunit SecD n=1 Tax=Thiobacillus thioparus RepID=UPI000375B578 similarity UNIREF
DB: UNIREF100
  • Identity: 89.4
  • Coverage: 604.0
  • Bit_score: 1041
  • Evalue 0.0
preprotein translocase protein SecD; K03072 preprotein translocase subunit SecD similarity KEGG
DB: KEGG
  • Identity: 82.8
  • Coverage: 604.0
  • Bit_score: 968
  • Evalue 7.20e-280
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 83.0
  • Coverage: 605.0
  • Bit_score: 973
  • Evalue 1.30e-280

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Taxonomy

RIFOXYD1_FULL_Hydrogenophilales_62_11_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1770
ATGAACCGCTTCCCGCTCTGGAAATATGTGCTCATCGGCATCACGCTGGTGGTCTCCTTCCTTTACACCCTGCCCAATTTTTTTGGCGAAGTGCCTGCGGTGCAGATTTCCCCCGTGCGCACCACTGAAAAGGTCGACTCCACCCTGCTGGGCCAGGTGGAGTCCTCGCTGAAAGCGGCCAACCTGGGCTATCAGGGCGTGGAACTGTCAGGAAACAGCATCAAGGTGCGATTAGGCACGACTGACGAGCAGATCAAGGCCAAGGACGTGCTGCAAAACAGCCTGGGCGGACGCTATACCGTCGCGCTCAATCTGGTGTCGGCCTCGCCCGCCTGGCTCTCGTCGATTCACGCGCTGCCGATGTATCTCGGCCTGGACTTGCGCGGCGGCGTGCACTTCCTGCTCGAGGTCGACATGAAAGCTGCACTAGAAAAAGCGGCCAACCGTTACCAGAATGATTTCCGCTCCGAACTTCGCAGCGACAAGATCCGCTACGGGCGCATCAGTCGCGAAGGCAGTGCCGTGACCGTGCATTTCGCCACGCGCGACCAGCGTGATGCCGCCATAAACAAGCTGGGCACGGCATTCCCCGATCTGGTGTTCACCCCGGAAGATGAGGCCGAAGGCTTTACCCTGACCGCACGCCTGAAGCCGGAAGCCGAAACCAAGGAGAAAGAACGCTCCCTGCAGCAAAACATCACCACGCTCAGAAACCGCGTCAACGAACTCGGCGTGGCCGAACCCGTCATTCAGCAGCAGGGGGACAGCCGCGTCGTAGTGCAATTGCCTGGCGTGCAGGACACCGCCAAGGCGAAGGAGATCCTGGGCCGCACCGCCACGCTGGAAATCCGCATGGTCGACGAACAGGCCGACCCGACGGCCATTCAGCAGGGCCAGACGCCGTACGGCGACGACATCGTAACCAGCCGCGATGGCGGGAAAATCGCCGTGAAGAAGGACGTGGTGTTGACCGGCGATTCGATCACCGATGCTTCGCCCGGCTTTGAAAGCACCAGCGGCCAGGCGGCTGTCCACGTCAACCTGGACGGCAAAGGCGCCCGCATCTTCAAGGACGTGACCCGCGAAAACGTCGGCAAGCGCATGGCCATCCTGCTGATCGAAAAGGGCGTGGCCGAGGCCATCACCGCGCCAGTCATCCGCGAGGAAATCGGCGGCGGCCGGGTGCAGATCACCGGCATGGAATCCGCCCAAGAGGCATCGGACATCGCCCTGCTGCTGCGCGCCGGCGCGCTGGCTGCCCCGATGCAGATCGTGGAAGAGCGCACCGTCGGACCCAGCATGGGTGCGGAAAACATCAGCAAGGGCTTCCGCTCCAACCTGTGGGGCTTCCTGGCCGTCACGCTGTTCATGGTGTTCTACTATCGCGTTTTCGGTCTCTTCTCGTCGATTGCGCTCGCCATCAACGGCATCTTCCTGGTCGCACTGCTGTCGATGCTGCAGGCCACGCTGACCCTGCCCGGCCTGGCCGGCATCGCACTCACGCTCGAGGAACTACGCAACGGCGCCACGCCACAGGCTGCGATCCACGCCGGCTACGACCGCGCCTGGGGCACCATTCTCGACTCCAACCTCACCACACTGATCGCCGGCGTCGCCCTGTTCTGGCTGGGCTCCGGCCCGGTGCGCGGCTTTGCGGTCGTCCTGTGTCTGGGCATCCTCACTTCCATGTTCAGCGCCGTCACCGTGTCGCGCGCCATGGTCAATCTCACCTATGGCCGCCAGGCGCGGCTGGCCAAGGTCTCCATCTAA
PROTEIN sequence
Length: 590
MNRFPLWKYVLIGITLVVSFLYTLPNFFGEVPAVQISPVRTTEKVDSTLLGQVESSLKAANLGYQGVELSGNSIKVRLGTTDEQIKAKDVLQNSLGGRYTVALNLVSASPAWLSSIHALPMYLGLDLRGGVHFLLEVDMKAALEKAANRYQNDFRSELRSDKIRYGRISREGSAVTVHFATRDQRDAAINKLGTAFPDLVFTPEDEAEGFTLTARLKPEAETKEKERSLQQNITTLRNRVNELGVAEPVIQQQGDSRVVVQLPGVQDTAKAKEILGRTATLEIRMVDEQADPTAIQQGQTPYGDDIVTSRDGGKIAVKKDVVLTGDSITDASPGFESTSGQAAVHVNLDGKGARIFKDVTRENVGKRMAILLIEKGVAEAITAPVIREEIGGGRVQITGMESAQEASDIALLLRAGALAAPMQIVEERTVGPSMGAENISKGFRSNLWGFLAVTLFMVFYYRVFGLFSSIALAINGIFLVALLSMLQATLTLPGLAGIALTLEELRNGATPQAAIHAGYDRAWGTILDSNLTTLIAGVALFWLGSGPVRGFAVVLCLGILTSMFSAVTVSRAMVNLTYGRQARLAKVSI*