ggKbase home page

SCNpilot_expt_500_bf_scaffold_1866_9

Organism: scnpilot_expt_500_bf_thiobacillus1

near complete RP 49 / 55 MC: 4 BSCG 49 / 51 MC: 7 ASCG 12 / 38 MC: 2
Location: comp(9605..12673)

Top 3 Functional Annotations

Value Algorithm Source
Acr/RND family transmembrane transporter n=1 Tax=Thiobacillus thioparus RepID=UPI000380A956 similarity UNIREF
DB: UNIREF100
  • Identity: 98.1
  • Coverage: 999.99
  • Bit_score: 1943
  • Evalue 0.0
  • rbh
Probable transmembrane drug efflux protein {ECO:0000313|EMBL:AAZ98484.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.6
  • Coverage: 999.99
  • Bit_score: 1697
  • Evalue 0.0
transmembrane drug efflux protein similarity KEGG
DB: KEGG
  • Identity: 84.6
  • Coverage: 999.99
  • Bit_score: 1697
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3069
ATGAACGACACCCCGCGTTTCGTGCCCGCGCGCGGCAACCTGTCGCGTTGGGCGATCGAGCATCCGGCACTGGTGCGCTTCTTCATCGTGCTGATCCTGCTGGTCGGTGTGCGGTCCTATTTTCAGTTGGGGCAGGCCGAAGATCCGCCGTTCACCTTCAAGACCATGCTGATCCAGGCGCAATGGCCAGGGGCGACCGCGCAGGAAGTGTCGGAACAGCTGACCGAACGGATCGAGAAGAAGCTGCAGGAAATGCCCGAGCTCGATTACGTGCAGAGCTACGCCAAGGCCGGTGAGACGGCACTTTTCGTCAATCTCAAGGAAACGGTGCGCGGGCGCGACGTGGCCGCGGCCTGGTATCAGGTCCGCAAGAAGATCGGCGATCTGAAGACGGCGCTACCGGCCGGTGTGCAGGGGCCCTTCTTCAACGACGAGTTCGGCGACACCTTCGGTTCGATCTATGCCTTCACCGGCGACGGCTTCAGCCGGTCCGAACTGCGCCGCGTCGCTGAGGACGCGCAGCGCGAAGTCCGCCGCCTGCCCAATGTGGGCAAGGTCGAGCTGTTCGGCATCGTCCCGGAAAAAATCTACGTCGAGATTCCTGCGCAAAAGCTCGCCACCCTCGGCCTCATGCCGCAGCAGATCATGCAGGCCGTGCAGGAGCAGAACGGCGTGGTGGCGAATGGGCGGATCGAAAACCAGGCCCTGTCGATCCCGCTGCGCGTGTCGGGGCCCTATTCCGACGTCGAGGGCGTGCGCGAAACGATCATCCGGATCGGCACGCGCAGCATCCGGCTGGGCGATATCGCCAGTGTGACGCGGCGCTACGAAGATCCGCCCACCGCCGAAATCCGTTCGCAGGGCGAGCCGGCGGTGCTGCTCGGGGTGTCGCTGGCCGACGGCGGCGACGTGGTGGCGATGGGACGTGCCGTGGCGGCCGCCATGGCGGACTTGCAGAAGACGCTGCCGGTGGGCATGGAGATCCAGCGGATCCATGACCAGCCCAGCATCGTCAGCCACGCGGTCCGGCTCTTCATGCAGAGTTTCTTCGAAGCCGTTGCCATCGTGCTGGCGGTGACCTTCCTGGCGCTCAAGTGGCGTGCCGGCCTGGTGGTGACGCTGTCCATCCCGGTGGTGCTGGCGATCACCTTCACCACGATGTGGCTGTTCGACATCGACCTGCATCGCATCTCGACCGGCGCGCTCATCATCGCCCTCGGCCTGCTGGTGGACGACGCCATCATCGCGGTGGAAATGATGGCGCACAAGCTGGAGGCCGGCTGGAACCGCTTCGAAGCGGCCACCTACGCCTTCCATTCGACCGCGTTTCCCATGCTGACCGGTACCTTGTTGACCGCCACCGCATTCCTGCCGATCGCGCTGGCCAAGTCGATGGTCGGCGAATACACCTTCGCCATTTTCGCGGTGACGACGATCGCGTTGCTGTCCTCCTGGCTGGTGGCGGTCGTGGTGACGCCTTACCTGGGGCATGTCCTGCTGAAACCGGCTCGCCACGTGACGGACGAGAATGCGGCGTATCTCACGCCGTTCTACCGGCGTTTCCGCGCCATGGTGAACGGGTGCCTCACCCATCGGCGCAGCGTGATTGCGCTGACGGTGGCGGCGCTGGTCGTCGGACTCGTCGCGATGCAGCGGGTCGAGAAACAGTTCTTTCCGCAGTCCGACCGGCTGGAAATCCTGGTCGAAATGTGGCTGCCCGAAGGCGCGTCCATCGAGGCCACGCGTGCCCAGGCGATCAGGCTCGAAACCCTGCTGCGGCAGGACAAGGATGTCGCCCACGTGCTCGACTACATCGGCCAGGGCGCGCCGCGTTTCGTGCTGGCGCTGGACCAGCGGCTGAACAACCGCAATTTCGCGCAGCTGGTGGTGATCGCGAAGGACGTGCCGGCGCGGGAGCGCGAACTTGCGCGTATCCGTCGGCTGTTCGAGACCGACTTCCCCAATGTGCGCGGACGTGCCGTGCGTTTCGAATATGGACCGCCCGCCGGCTACCCTGTGCAGTACCGATTGTCCGGCGCCGACATCCCGAGGCTCAAGATCGAAGCCGAGAAACTGCGCAGGATCGTCGCGGCCCAGCCGCAGGTGACGGCCGTGAACCTGGACTGGAACGAGCAGTCGCTGGCGATCAAGGTCCAGCTCGACCAGGACAAGATCAAGGCGCTCGGCCTCAGCTCGGATGCAGTCGGGCGCCTGTTGGCGCTGGAGTTGTCGGGGACGACGATTACCCAGTTCCGGGAAGACGATCAGTTGATCGACGTCGAATTGCGCATTCCGCGCAAGGAACATCGCGACGTCGATGTGCTGAAATCGCTGCCGGTCGGCAGCTTCGACGGACAAAGCGTGACCCTGGGGCAGATCGCCACCTTCCGTCCGGTGTTCGAGGACGGCGTGATCTGGCGGCGCGACCGCCTGCCGACGATCTCGGTGCGCGGCGATCCGGTGGGTAACACGCAGCCGGCGACGATCATCGAATCGATTGCGCCGCAGGTGGCCCGATTCAAGGCGCAGCTGCCGCCCGGTTTCCGGCTGGAAATAGGGGGACCGGTGGAAAGCAGTGCCAAGGCCAATGCCGCCATCGCCGCCTCGTGGCCGTTGATCGTGGTCACCACGCTGACACTGCTGATGCTGCAACTCGGCAATTTCGCGCGCGCCTTGCTGGTGGTGCTTACGGCGCCGCTCGGCATCATCGGCGTGGCGGTCGCGCTGCTGGTGACCGGCCAGCCGATGGGCTTCGTGGCCTTGCTGGGCATCATCTCGCTGTCCGGCATGATCATGCGCAATTCGGTGATCCTGGTCGACCAGATCCAGCAGGACGTGGCTCGCGGCCTGTCGCAGTGGGATGCGATCGTCGAATCCACAGTGCGGCGCATGCGGCCGATCAGCCTCACCGCCGCCGCCGCGGTGCTGGCGATGATCCCGCTGTCGCGCTCGATTTTCTGGGGTCCCATGGCCGTATCGGTCATGGGGGGGCTGATCGCGGCGACCTTCCTCACGCTGTTTTTTCTGCCTGCCCTGTATGCGGCTTGGTTTAGGGTAAAACCGGGCTAA
PROTEIN sequence
Length: 1023
MNDTPRFVPARGNLSRWAIEHPALVRFFIVLILLVGVRSYFQLGQAEDPPFTFKTMLIQAQWPGATAQEVSEQLTERIEKKLQEMPELDYVQSYAKAGETALFVNLKETVRGRDVAAAWYQVRKKIGDLKTALPAGVQGPFFNDEFGDTFGSIYAFTGDGFSRSELRRVAEDAQREVRRLPNVGKVELFGIVPEKIYVEIPAQKLATLGLMPQQIMQAVQEQNGVVANGRIENQALSIPLRVSGPYSDVEGVRETIIRIGTRSIRLGDIASVTRRYEDPPTAEIRSQGEPAVLLGVSLADGGDVVAMGRAVAAAMADLQKTLPVGMEIQRIHDQPSIVSHAVRLFMQSFFEAVAIVLAVTFLALKWRAGLVVTLSIPVVLAITFTTMWLFDIDLHRISTGALIIALGLLVDDAIIAVEMMAHKLEAGWNRFEAATYAFHSTAFPMLTGTLLTATAFLPIALAKSMVGEYTFAIFAVTTIALLSSWLVAVVVTPYLGHVLLKPARHVTDENAAYLTPFYRRFRAMVNGCLTHRRSVIALTVAALVVGLVAMQRVEKQFFPQSDRLEILVEMWLPEGASIEATRAQAIRLETLLRQDKDVAHVLDYIGQGAPRFVLALDQRLNNRNFAQLVVIAKDVPARERELARIRRLFETDFPNVRGRAVRFEYGPPAGYPVQYRLSGADIPRLKIEAEKLRRIVAAQPQVTAVNLDWNEQSLAIKVQLDQDKIKALGLSSDAVGRLLALELSGTTITQFREDDQLIDVELRIPRKEHRDVDVLKSLPVGSFDGQSVTLGQIATFRPVFEDGVIWRRDRLPTISVRGDPVGNTQPATIIESIAPQVARFKAQLPPGFRLEIGGPVESSAKANAAIAASWPLIVVTTLTLLMLQLGNFARALLVVLTAPLGIIGVAVALLVTGQPMGFVALLGIISLSGMIMRNSVILVDQIQQDVARGLSQWDAIVESTVRRMRPISLTAAAAVLAMIPLSRSIFWGPMAVSVMGGLIAATFLTLFFLPALYAAWFRVKPG*