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SCNpilot_expt_500_bf_scaffold_3951_4

Organism: scnpilot_expt_500_bf_thiobacillus1

near complete RP 49 / 55 MC: 4 BSCG 49 / 51 MC: 7 ASCG 12 / 38 MC: 2
Location: 1744..2799

Top 3 Functional Annotations

Value Algorithm Source
outer membrane protein (porin) id=12498486 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 52.6
  • Coverage: 365.0
  • Bit_score: 342
  • Evalue 6.30e-91
outer membrane protein (porin) similarity KEGG
DB: KEGG
  • Identity: 43.8
  • Coverage: 370.0
  • Bit_score: 295
  • Evalue 2.80e-77
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 49.2
  • Coverage: 384.0
  • Bit_score: 340
  • Evalue 3.30e-90

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Taxonomy

RIFOXYA1_FULL_Hydrogenophilales_63_33_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1056
ATGCAAAAGAAACTGATCGCGCTGGCACTGGCTTCCGCCTTTGCTGCTCCCGCCTTCGCTGCGACGTCCAACGTCGATATTTACGGTAACCTGCACATGTCCGTTGATGTGCTGGACAATGGTAGCAATAGCGGTACCAACGTCTCCAGCAACGCTTCCGCGTTGGGCGTCAAGGGCTCCGAAGACCTGGGCGGCGGCCTGAATGCCATCTGGCAGGTCGAGACCACCCTGGGCGGTGAAAGACGGGGTGCATCCTTTACCTCAGCACGCGATACCTTTGTCGGCCTCAAGGGCGGCTTCGGTACGGTCCGTCTGGGTTACTTCGATACTCCGACCAAGACGCTTAGCCGCAAGCTGGACCTGTTTAACAACCGTATTGGCGACACCCGCAACCTGCTGCGCTCGGATGCAGCCTCCGGCGCACTTGTTTCCAGTAACAATTCTTGGGAAGAGCGTTTCGACAACGGCATTCGTTACGACACCCCTTCGTTCAGCGGTTTCTCGGCTTCCGTGCATTACTCGACCAACTTCGACAGCGCGGGCACCACTACGAATAACAACACCGACGCTTACAGCCTTGGCGCCAACTATGAAAACGGCCCGCTGTTTGCTGGCGCAACCTACCAGCGCAACAACCTCACCACCGGTACCGGCGACGAAACCAACTGGCGTCTGGGCGCTGGTTATAACATGGGTGATCTGAAGATGGTCGCACTTTACTCGAAGTCGAAAGATCAGCGTGGTGTCAGTGGTGCGGATCGTGATGTCTGGGGCTTGGGCGCCGGTTACAAATTGGGCAACGGTGAAATCAAGGGCCAGTTCTATAAGGCAGGTAAGGACGATACTCTGGCTGACAGTGGCGCTAAGATGTACGTGGTTGGCTACGACTACAGCCTGAGCAAGCGTACGCTGGCTTACATTGCCTACGCCAAGACCAAGAATGACGCGAACGCCCAGTTCTCCGTGATGGGCGGCGGCGGACATGGTGATGACTTGACGATCGCATCAGGCAAGGATCCTGATGCGTTCTCAATCGGCATGATCCACAAGTTCTAA
PROTEIN sequence
Length: 352
MQKKLIALALASAFAAPAFAATSNVDIYGNLHMSVDVLDNGSNSGTNVSSNASALGVKGSEDLGGGLNAIWQVETTLGGERRGASFTSARDTFVGLKGGFGTVRLGYFDTPTKTLSRKLDLFNNRIGDTRNLLRSDAASGALVSSNNSWEERFDNGIRYDTPSFSGFSASVHYSTNFDSAGTTTNNNTDAYSLGANYENGPLFAGATYQRNNLTTGTGDETNWRLGAGYNMGDLKMVALYSKSKDQRGVSGADRDVWGLGAGYKLGNGEIKGQFYKAGKDDTLADSGAKMYVVGYDYSLSKRTLAYIAYAKTKNDANAQFSVMGGGGHGDDLTIASGKDPDAFSIGMIHKF*