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SCNpilot_expt_500_bf_scaffold_27673_3

Organism: scnpilot_expt_500_bf_thiobacillus1

near complete RP 49 / 55 MC: 4 BSCG 49 / 51 MC: 7 ASCG 12 / 38 MC: 2
Location: 822..1301

Top 3 Functional Annotations

Value Algorithm Source
CzcC family heavy metal RND efflux outer membrane protein id=12498617 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 90.6
  • Coverage: 160.0
  • Bit_score: 277
  • Evalue 8.60e-72
CzcC family heavy metal RND efflux outer membrane protein similarity KEGG
DB: KEGG
  • Identity: 66.9
  • Coverage: 160.0
  • Bit_score: 201
  • Evalue 2.50e-49
Heavy metal RND efflux outer membrane protein, CzcC family {ECO:0000313|EMBL:AAZ97288.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.9
  • Coverage: 160.0
  • Bit_score: 201
  • Evalue 1.10e-48

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Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 480
ATGCGTATTTCCCAATCAGCCGACCGCTTGAGTCGGTTCCCGTTGTGCTGCGTGACTACGCTGCTGGGGCTGGCGAGCCTCGTCAGCACGGCGTTCGCCGAGCCGCTCTCTTTCAATGCCGCACTGGCGTTGGCCGTGCGGGAAACACCCACGCTCCGGGCAGAATCAGCGCAGGTCGATGCTGCCCGGCAAGCGGCCATTCCAGCTGGCGAGTTGCCCGATCCCAAACTGACCTTGGGGCTCGATAACGTACCCGTCGAGGGCGTTGATCGTTTCAGCCTGTCCAGCGAACCGATGACCATGCAACGCATCGGCGTCATGCAGGAATTTCCCAATAATGCCAAGCGCGGCGCACGCGTTGAAGTTGCGCGTGGGCGGATTGCGCTGAGCGAAGCGCAAATCCGCATTACCCGCCTCACCGTGTTGCGGGAAACGGCGGCAGCATGGATTGCGCGCGATACGGTCGAACACCAGCTCGCG
PROTEIN sequence
Length: 160
MRISQSADRLSRFPLCCVTTLLGLASLVSTAFAEPLSFNAALALAVRETPTLRAESAQVDAARQAAIPAGELPDPKLTLGLDNVPVEGVDRFSLSSEPMTMQRIGVMQEFPNNAKRGARVEVARGRIALSEAQIRITRLTVLRETAAAWIARDTVEHQLA