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SCNpilot_expt_500_bf_scaffold_400_8

Organism: SCNPILOT_CONT_300_BF_Microbacterium_72_41

near complete RP 51 / 55 MC: 4 BSCG 50 / 51 MC: 2 ASCG 12 / 38
Location: comp(5331..5852)

Top 3 Functional Annotations

Value Algorithm Source
ABC-type spermidine/putrescine transport systems, ATPase components n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NCI2_MICTS similarity UNIREF
DB: UNIREF100
  • Identity: 70.3
  • Coverage: 172.0
  • Bit_score: 234
  • Evalue 9.10e-59
spermidine/putrescine ABC transporter ATPase similarity KEGG
DB: KEGG
  • Identity: 70.3
  • Coverage: 172.0
  • Bit_score: 234
  • Evalue 2.90e-59
ABC-type spermidine/putrescine transport systems, ATPase components {ECO:0000313|EMBL:BAJ74851.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.3
  • Coverage: 172.0
  • Bit_score: 234
  • Evalue 1.30e-58

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Taxonomy

Microbacterium testaceum → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 522
GTGAGCGAGAGGCATCCCCGCAAGAGGGCGGCGTTCGAACCGGTCGCCGCGCCGGTCGCCCGGAACCCCGCGATGCGGCGCCCGGCGGCGACGGTCGCCGGCGGCGTGCTCGTGCTGCTGCGCGCCGCGTCCGGGATCCTGTGGGGTCTCACGGTCGTCTTCCCCCTGCCGTCGTGGATGCAGACGGTCGCCGGCGCGGCGGACGGTTCCGGCGCGGATCCGACCTTCACCCTCTCGGACCTCGGGCTCGACGGCGCGGTGTTCTTCGGCATCCTGGGCGTGATCACCCTGGTGCAGGCGGTCTTCGGCATCCTGCTGCTGCGCGGGAGCAACGTCGCCCGGGTGATCGTGATGCTCGTGTCGACCCTCTCGATCATCACGGCGTTCGCGGGCTGGTGGGAGCTCGGGCAGGAGATCACGGTGGGCACGACCCTCGTCACGGTGAGCCTCGACATCCTCGTGCTCCTCGCCCTCTCGAGCCGGGATGCCGCCGCCTACGCCCGCCGCAACGAGAAGGTCTGA
PROTEIN sequence
Length: 174
VSERHPRKRAAFEPVAAPVARNPAMRRPAATVAGGVLVLLRAASGILWGLTVVFPLPSWMQTVAGAADGSGADPTFTLSDLGLDGAVFFGILGVITLVQAVFGILLLRGSNVARVIVMLVSTLSIITAFAGWWELGQEITVGTTLVTVSLDILVLLALSSRDAAAYARRNEKV*