ggKbase home page

SCNpilot_expt_500_bf_scaffold_449_10

Organism: SCNPILOT_EXPT_300_BF_Thiobacillus_SCN1_62_76

near complete RP 52 / 55 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: comp(10076..10540)

Top 3 Functional Annotations

Value Algorithm Source
outer membrane lipoprotein; K06077 outer membrane lipoprotein SlyB id=12493023 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 99.4
  • Coverage: 155.0
  • Bit_score: 284
  • Evalue 5.20e-74
outer membrane lipoprotein; K06077 outer membrane lipoprotein SlyB similarity KEGG
DB: KEGG
  • Identity: 70.1
  • Coverage: 154.0
  • Bit_score: 209
  • Evalue 8.80e-52
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 78.7
  • Coverage: 155.0
  • Bit_score: 232
  • Evalue 3.30e-58

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYD1_FULL_Hydrogenophilales_62_11_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 465
ATGAAAAATACCTCAGCAATCGTGACCGCCATGCTCATGGCGGCGAGTCTGGCCGTGCTCGGCGGCTGCGCCAGCGGCGTCGGCGGCAAGGATTACGGCCGCGATCAGACCCGTGCCGTGCAGGAAGTCCAGATGGGCGTGGTGGAATCGGTGCGCGAAGTCAATATCGAAGGCACCAAGACGCCGATAGGCGCGGGCGCGGGCGCCGTCGTCGGCGGCGTGGCCGGCAGCACGGTCGGCAGCGGCAAGGGCAGCGTGGTCGGTGCGGCGCTCGGCGCGGTGCTGGGCGGCCTGGGCGGCGCGGCCGTGGAAGAAGGGACAACCCGCCAGAAAGGCGTGGAAATCACCGTCAGGCTCGATTCAGGCCGCATGCTCGCCATCACCCAGGCGGCGGACGAGGTGTTCCAGGTCGGCGACCGCGTGCGCGTGCTGTCGGGCGGCGGCGCGACGCGCGTGTCGCATTGA
PROTEIN sequence
Length: 155
MKNTSAIVTAMLMAASLAVLGGCASGVGGKDYGRDQTRAVQEVQMGVVESVREVNIEGTKTPIGAGAGAVVGGVAGSTVGSGKGSVVGAALGAVLGGLGGAAVEEGTTRQKGVEITVRLDSGRMLAITQAADEVFQVGDRVRVLSGGGATRVSH*