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SCNpilot_expt_500_bf_scaffold_414_1

Organism: SCNPILOT_EXPT_300_BF_Thiobacillus_SCN1_62_76

near complete RP 52 / 55 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: 150..974

Top 3 Functional Annotations

Value Algorithm Source
MscS mechanosensitive ion channel:conserved TM helix; K03442 small conductance mechanosensitive channel id=12493418 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 275.0
  • Bit_score: 524
  • Evalue 5.30e-146
  • rbh
MscS mechanosensitive ion channel:conserved TM helix; K03442 small conductance mechanosensitive channel similarity KEGG
DB: KEGG
  • Identity: 58.8
  • Coverage: 272.0
  • Bit_score: 321
  • Evalue 2.80e-85
  • rbh
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 89.5
  • Coverage: 275.0
  • Bit_score: 475
  • Evalue 5.20e-131

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Taxonomy

RIFOXYA1_FULL_Hydrogenophilales_63_33_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 825
ATGGACGAACCACTGCAAACACTGACATACGCCAGGAAGACCGCGATCGAACTGGCCATCCAGTTCGGTCCCAAGCTGCTGGTGGCGCTGCTGATCCTGGCGGCGGGCTATTACGTCGGGCGCTGGGTGGGCAGGCTGGCCGACTCGATGCTGGCGAAACTCGGGCTCGACGAGCCTCTGCGCGTGCTGCTGGTTCGCATCGTGCGCATCCTGGTGCTGGGCCTGTTCCTCATCATGGCGCTGCAGAACCTGGGCGTGCAGCTGTTGCCGCTGATCGCCGGGCTGGGCGTGGCGGGCGCCGGCGTCGCGCTGGCCATGCAGGGCGTGCTCGGCAACCTGGCGGCCGGCCTGACGATTCTCTTCACCCGGCCGTTCCACGTGGGCGAATATATTTCCATCGCCGGCGAGGAAGGGACGGTCGATGAGATCAAGCTGTTCAATACCGTGCTGAGCCATCCCGACCGCTCACGCGTCGTCATCCCCAACCGCAAGATCGTCGGCGAGATCCTGCACAACTTCGGCGCCCTGCGGCAACTCGACGTGGTCGTCAACGTGGCCTACGACACCGACGTCAAACTTGCACTCGCCACCATCCAGGACCTGCTGCGCACGCACCCGAAAATCCTGCAGGAACCCGAGCCGGTGGTCCGTGTGCTGACGCTGGCCGATTCCAGCATCCGCATCGCCATCTGCCCGTGGGCAGCCGTCGCCGATTTCAATGCGGCATCGAGCGACGTCACCCAGGCGGTGCTGGAAAGTTTCCGTGCACACGGCATCGTCATCCCCCTGCCGCAGCGCGAAGTGCGCCTGCTGGGCACGACATGA
PROTEIN sequence
Length: 275
MDEPLQTLTYARKTAIELAIQFGPKLLVALLILAAGYYVGRWVGRLADSMLAKLGLDEPLRVLLVRIVRILVLGLFLIMALQNLGVQLLPLIAGLGVAGAGVALAMQGVLGNLAAGLTILFTRPFHVGEYISIAGEEGTVDEIKLFNTVLSHPDRSRVVIPNRKIVGEILHNFGALRQLDVVVNVAYDTDVKLALATIQDLLRTHPKILQEPEPVVRVLTLADSSIRIAICPWAAVADFNAASSDVTQAVLESFRAHGIVIPLPQREVRLLGTT*