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SCNpilot_expt_500_bf_scaffold_414_30

Organism: SCNPILOT_EXPT_300_BF_Thiobacillus_SCN1_62_76

near complete RP 52 / 55 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: comp(21599..22042)

Top 3 Functional Annotations

Value Algorithm Source
putative positive regulator of sigma E activity; K03803 sigma-E factor negative regulatory protein RseC id=12493445 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 148.0
  • Bit_score: 293
  • Evalue 1.10e-76
putative positive regulator of sigma E activity; K03803 sigma-E factor negative regulatory protein RseC similarity KEGG
DB: KEGG
  • Identity: 66.2
  • Coverage: 145.0
  • Bit_score: 197
  • Evalue 2.50e-48
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 87.8
  • Coverage: 148.0
  • Bit_score: 255
  • Evalue 4.50e-65

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Taxonomy

RIFOXYA1_FULL_Hydrogenophilales_63_33_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 444
ATGCTGGAACAAACAGCCGAAGTCGTCCATGCCGCATCCGATGGCGTCTGGGTGCAGGCAGTCGAGCCGTCGGGTTGCGGTACCTGCGGCGGTCAGGGATGTTCGTCGCGCCGCATTGCCGAACTGTTCCAGCGGAAACACCGGAATTTTCTGGTCGAGTGCGATCTGGCGTTGGCACCGGGAGACCGGGTGGTCATTGGAATTGCAAAAGGCAGCGTGCTCAGAAGCGCCGTGCGTGCGTACGGGATACCGCTGGCGCTGATGCTGGCCGGCGCATTGCTGGCGCAGGCAATACGGCCGGGCGACGGCGCGGCGGTGCTCGGCATGCTGATCGGTGGGATGGTGGGTTGGCCGCTGGCACGGAGCGGCCGGACGGCGCGACCGGTCGTGCTCAGACGCGAAGACGGCATTCCGTTTCAAGTAGTGATGAAAGGACAGTCATGA
PROTEIN sequence
Length: 148
MLEQTAEVVHAASDGVWVQAVEPSGCGTCGGQGCSSRRIAELFQRKHRNFLVECDLALAPGDRVVIGIAKGSVLRSAVRAYGIPLALMLAGALLAQAIRPGDGAAVLGMLIGGMVGWPLARSGRTARPVVLRREDGIPFQVVMKGQS*