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SCNpilot_expt_500_bf_scaffold_302_10

Organism: SCNPILOT_EXPT_300_BF_Thiobacillus_SCN1_62_76

near complete RP 52 / 55 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: comp(8328..9260)

Top 3 Functional Annotations

Value Algorithm Source
VacJ-like lipoprotein; K04754 lipoprotein id=12495579 bin=THIO_HI species=unknown genus=unknown taxon_order=unknown taxon_class=Zetaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 97.5
  • Coverage: 317.0
  • Bit_score: 624
  • Evalue 4.30e-176
  • rbh
VacJ-like lipoprotein; K04754 lipoprotein similarity KEGG
DB: KEGG
  • Identity: 47.0
  • Coverage: 264.0
  • Bit_score: 233
  • Evalue 1.10e-58
VacJ-like lipoprotein {ECO:0000313|EMBL:ABB75846.1}; Flags: Precursor;; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.0
  • Coverage: 264.0
  • Bit_score: 233
  • Evalue 5.10e-58

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Taxonomy

Nitrosospira multiformis → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 933
ATGTCGTGCCTGGTAGCCCCATTTCACGGGCCTATCCCAACCCTGCGTAACAGGCTTGTCCTCTGGGCGCAGGGCCTGTGCCTCGTATTGGCTGTAGGAGGCTGCGCGTCGATTCCGCCGGATCAACGCGATCCTGGCGACCGCTTTGAGGCGGGCAATCGCTCGGTCTACAATTTCAACGAGGGACTGGATCGTGTGGCGCTGAAGCCGGTTTCCAGGGCCTATGTCGACCACATCCCCCAGGTCGTGCGTACTGCGGCAAGCAATTTTTTCAATAACCTGCGCTATCTGGATACGGTGCTGAACGGCTTTCTTCAGGGCAAGGTGGAGCAAGGCAGTTCCGATCTCATGCGTTTCGGGATCAACAGCACGATCGGCATACTGGGTTTGTTCGACGTCGCCACGAAGATGGGACTGCCGGCGCACAATGAGGATTTTGGCCAGACCCTGGGGGTCTGGGGAGCGGGCCCTGGCGAATATCTGGTTTATCCACTGATCGGTCCAAGTGGCGTGCGCGATACCGGAGGAATCGTGGTCAGCCTGCTGACCAATCCTATCGTCTATATGGCATCGCCAGTAGCCATACCGCTAGGCATCATCAGCGTGATCGATCTGCGTGCGCGCAATGAGGGCTTCACGCGCTTCCGCGATACGGCGGCGCTCGATCCCTATATCTTCACGCGCGAGTCCTACCTGCAATATCGGCAATTCGAAGTGTACGACGGCAAACCCCCACGGGTGAAGCTTGAATTCCTCGATGATCCGGCTGGTGACCCGCATCCGGCGGGTGAACCGCAGACGATGGGTGAACCGCAGACGATGGGTGAACCGCAGACGGAGAAAACCGTAGCGCCCGAAGCGGCACCATCGCTGCCCCAGGAGCAGCCAGGAGTCGTGTCGTCCTTCAGCCCGATCGAACAACCCGAGCAGTAA
PROTEIN sequence
Length: 311
MSCLVAPFHGPIPTLRNRLVLWAQGLCLVLAVGGCASIPPDQRDPGDRFEAGNRSVYNFNEGLDRVALKPVSRAYVDHIPQVVRTAASNFFNNLRYLDTVLNGFLQGKVEQGSSDLMRFGINSTIGILGLFDVATKMGLPAHNEDFGQTLGVWGAGPGEYLVYPLIGPSGVRDTGGIVVSLLTNPIVYMASPVAIPLGIISVIDLRARNEGFTRFRDTAALDPYIFTRESYLQYRQFEVYDGKPPRVKLEFLDDPAGDPHPAGEPQTMGEPQTMGEPQTEKTVAPEAAPSLPQEQPGVVSSFSPIEQPEQ*