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SCNpilot_expt_500_bf_scaffold_763_27

Organism: SCNPILOT_EXPT_300_BF_Thiobacillus_SCN1_62_76

near complete RP 52 / 55 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: comp(29689..30282)

Top 3 Functional Annotations

Value Algorithm Source
TetR family transcriptional regulator id=12494071 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 198.0
  • Bit_score: 396
  • Evalue 1.20e-107
  • rbh
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 56.1
  • Coverage: 196.0
  • Bit_score: 221
  • Evalue 2.20e-55
Possible Transcriptional Regulator, TetR family {ECO:0000313|EMBL:AAZ97937.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.1
  • Coverage: 196.0
  • Bit_score: 221
  • Evalue 9.70e-55

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Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 594
GTGAAAAGTACAAATGCGGCGCGGCGCGCCGACGATCCCCGCCAGCTGGTTCTGGATACGGTACTCGCGCTGTTCAGCGAGCGCGGTTACTTCGCCACCTCGGTACAGGACATCAGCCGCGAGTCGGGCGTGAGTGTCGGTTCCCTCTACCATCACTTCGGCGACAAGGAGGGTATTGCCCGTGCCCTGTACCAGACGCTGTCCGACCGGATGAGCGGCAGGATTTCATGGATACGCGCCCACCGAAAAACGGCGCACGACCAGTGCCGTGATGTCGTCAGGACCCTGTTCGACATGACCGAATCCGAGCCGCTGGTGGTGGACTTCATGCTCTATGCCAAGCACAAGGATTTCCTGCCGGAAGAAAAATCGATCTGCTCGTCAAAACCTTTCGAACTGATGCGTGCGATGGTGGCGGCAGGCATGGCATCGGGCGAGATTCGGCCGATGGACCTGATGGTTGCATCCAGCAGTCTGTGCGGCGGGCCGATCCGGATGATCGTGGCTCGCCTCGACGGTATCCTGCAAGCGCCGCTGCCCCACTACCTTGACGAAGTGTGGGACTGCGCCTGGAGGTCAGTCGCCGCCCGGTAG
PROTEIN sequence
Length: 198
VKSTNAARRADDPRQLVLDTVLALFSERGYFATSVQDISRESGVSVGSLYHHFGDKEGIARALYQTLSDRMSGRISWIRAHRKTAHDQCRDVVRTLFDMTESEPLVVDFMLYAKHKDFLPEEKSICSSKPFELMRAMVAAGMASGEIRPMDLMVASSSLCGGPIRMIVARLDGILQAPLPHYLDEVWDCAWRSVAAR*