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SCNpilot_expt_500_bf_scaffold_1100_13

Organism: SCNPILOT_EXPT_300_BF_Thiobacillus_SCN1_62_76

near complete RP 52 / 55 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: 9277..10755

Top 3 Functional Annotations

Value Algorithm Source
NusA antitermination factor; K02600 N utilization substance protein A id=12495470 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 493.0
  • Bit_score: 940
  • Evalue 7.30e-271
  • rbh
NusA antitermination factor; K02600 N utilization substance protein A similarity KEGG
DB: KEGG
  • Identity: 95.9
  • Coverage: 492.0
  • Bit_score: 901
  • Evalue 9.00e-260
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.9
  • Coverage: 492.0
  • Bit_score: 901
  • Evalue 4.00e-259

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Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1479
ATGAGCCGTGAAATGTTGATGCTGGCCGATGCGCTGGCACGCGAAAAGAACGTGAGCCAGGAGGTGGTGTTCGAGGCCCTGGAGCAGGCACTCGCCTCCGCCACCAAAAAACGCTTCAAGGAAGAGTCCGATGTGCGCGTATCGATCGACCACGCGACCGGTGACTATGAATCCTTCCGTCGCTGGCAGGTCGTGACCGAAGCCGACCTGGAGTCCGAGGGCTATCAGATCCTGCTGATCGATGCCCAGGACAAGATCCCCGACATCGAAATCGGCGACTACATCGAAGAACCGCTGGAAAACATCGAATTCGGCCGCATCGGTGCCCAGGCGGCCAAGCAGGTCATCCTGCAAAAGATCCGCGACGCCGAGCGCGAGCAGATCATCAGCGACTTCCTTGCCCGCAAGGAACACCTCGTCAACGGCGTGGTGAAGCGGATCGATCGCGGCAACGCCATCATCGAATCCGGCCGCGTCGAAGGCTTTCTGCACCGCGACCAGATGATCCCGCGCGAAAACCTGCGCGTCGGCGACCGCGTGCGTGCCTACCTGCTGCGCATCGATCGGGGGGTCCGCGGTCCGCAGGTCGTGCTGTCGCGCACCGCATCCGAGTTCATCATGAAGCTGTTCGAGCTGGAAGTGCCTGAAATCGAGGAAGGCCTGCTCGAGATCAAGGCGGCCGCCCGCGACCCCGGCCTGCGTGCCAAGATTGCCGTGGTCTCGCACGACCCGCGCATCGATCCGATCGGCACCTGCATCGGTCTGCGCGGCTCGCGCGTCACCTCGGTGACCAACGAACTGGCCGGCGAACGCGTCGACATCATCCACTGGTCGGCCGACCCCGCCCAATACGTCATCAACGCGCTGGCGCCCGCCGAGGTCAGCTCCATCGTGGTGGATGAGGACAAGCACAGCATGGACGTGGTGGTGGACGAGGAACAGCTGGCGATGGCGATCGGCCGCGGCGGCCAGAACGTCCGTCTGGCATCCGAGCTGACCGGCTGGGAACTCAACATCATGTCGCGCGAAGCGGCGGATGAAAAACACTCGGCCGAAAGCGGCAAGACGCTCGCGCTCTTCATCGAGAAGCTCGACGTGGACGAGGAGGTCGCCCAGATCCTGGTCGACGAAGGCTTCTCCACGCTGGAAGAAGTCGCCTACGTCCCGCTGAACGAAATGCTCGAGATCGAGGCCTTCGACGAAGATCTGGTCAACGAATTGCGTAACCGTGCCCGCAACGCCCTGCTGACCGCCGCCATCGTCGGCGAGGAACAGGTCGAGGCCTCGGCAGGCGACTTGCTGTCGCTCGAAGGCATGGACGCCGAGACCGCACGTACGCTCGCCAGCAAGGGCGTCCACACCACCGAGGATCTGGCCGAGCTGGCCGTCGATGAGCTGACCGAAATGGCGGCCATGGATGCCGAACGCGCCAAACAATTGATCATGGCCGCACGCGCGCCCTGGTTCGCCCAAGGCTAA
PROTEIN sequence
Length: 493
MSREMLMLADALAREKNVSQEVVFEALEQALASATKKRFKEESDVRVSIDHATGDYESFRRWQVVTEADLESEGYQILLIDAQDKIPDIEIGDYIEEPLENIEFGRIGAQAAKQVILQKIRDAEREQIISDFLARKEHLVNGVVKRIDRGNAIIESGRVEGFLHRDQMIPRENLRVGDRVRAYLLRIDRGVRGPQVVLSRTASEFIMKLFELEVPEIEEGLLEIKAAARDPGLRAKIAVVSHDPRIDPIGTCIGLRGSRVTSVTNELAGERVDIIHWSADPAQYVINALAPAEVSSIVVDEDKHSMDVVVDEEQLAMAIGRGGQNVRLASELTGWELNIMSREAADEKHSAESGKTLALFIEKLDVDEEVAQILVDEGFSTLEEVAYVPLNEMLEIEAFDEDLVNELRNRARNALLTAAIVGEEQVEASAGDLLSLEGMDAETARTLASKGVHTTEDLAELAVDELTEMAAMDAERAKQLIMAARAPWFAQG*