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SCNpilot_expt_500_bf_scaffold_1100_21

Organism: SCNPILOT_EXPT_300_BF_Thiobacillus_SCN1_62_76

near complete RP 52 / 55 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: comp(19019..19687)

Top 3 Functional Annotations

Value Algorithm Source
winged helix family two component transcriptional regulator; K02483 two-component system, OmpR family, response regulator id=12495477 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 223.0
  • Bit_score: 428
  • Evalue 4.20e-117
  • rbh
winged helix family two component transcriptional regulator; K02483 two-component system, OmpR family, response regulator similarity KEGG
DB: KEGG
  • Identity: 55.6
  • Coverage: 225.0
  • Bit_score: 243
  • Evalue 7.90e-62
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 93.7
  • Coverage: 223.0
  • Bit_score: 403
  • Evalue 2.00e-109

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Taxonomy

RIFOXYA1_FULL_Hydrogenophilales_63_33_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 669
ATGAAAATCCTGCTTGTGGAAGATGACCCCACCCTGGGCGATGCCGTGATGCTGGCGCTCAGGCAGGCGGGCTTCGCGGTCGACTGGAGCCGCGATGGCGTGCAGGCGGAAAACGCGCTGGCGGGGTACGCCTACGACGCCATGCTGCTCGATCTGGGACTGCCGCGACGCGAGGGCCTGGAAGTCTTGCGCAATGCGCGCAAACGCGGTGCGGCCCTGCCGGTGATGGTTCTCACCGCGCGCGATACCGTGGAGGATCGCGTGCGCGGCCTTGACGCCGGTGCGGACGACTACCTGTTGAAGCCGTTCGCGCTGGACGAATTGCTGGCGCGGCTGCGCGCCTTGCTGCGGCGGGCGCATGGCGTGGCCGATACCCGGATCCGCCTGGGACGCTTCGGCTTCGACAGCGTGAAGCGGCAGGCCAGCGTGGACGAGACGCCGCTGGCGCTGTCCGCCCGCGAAGTGGAAGTGCTTGAAATCCTGCTCAGCCACGTCGGGCGCGTCACGGCCAAGGAAGCGATCGCCGATCGCCTGACGGGATGGGACGAGGGCGTGGGCGACAATGCGGTGGAGGTCTACATTCACCGCCTGCGACGCAAGCTCGAGGGGTCTGGCGTGGCGATCCGCACGCTGCGCGGCCTGGGCTATCTGCTGGAAGCCAAAGCTTGA
PROTEIN sequence
Length: 223
MKILLVEDDPTLGDAVMLALRQAGFAVDWSRDGVQAENALAGYAYDAMLLDLGLPRREGLEVLRNARKRGAALPVMVLTARDTVEDRVRGLDAGADDYLLKPFALDELLARLRALLRRAHGVADTRIRLGRFGFDSVKRQASVDETPLALSAREVEVLEILLSHVGRVTAKEAIADRLTGWDEGVGDNAVEVYIHRLRRKLEGSGVAIRTLRGLGYLLEAKA*