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SCNpilot_expt_500_bf_scaffold_1041_9

Organism: SCNPILOT_EXPT_300_BF_Thiobacillus_SCN1_62_76

near complete RP 52 / 55 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: 5723..7297

Top 3 Functional Annotations

Value Algorithm Source
peptidoglycan-binding protein LysM; K08307 membrane-bound lytic murein transglycosylase D [EC:3.2.1.-] id=12493495 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 99.4
  • Coverage: 525.0
  • Bit_score: 1041
  • Evalue 0.0
  • rbh
peptidoglycan-binding protein LysM; K08307 membrane-bound lytic murein transglycosylase D [EC:3.2.1.-] similarity KEGG
DB: KEGG
  • Identity: 59.8
  • Coverage: 508.0
  • Bit_score: 589
  • Evalue 8.10e-166
Tax=GWE1_Thiobacillus_62_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 64.4
  • Coverage: 531.0
  • Bit_score: 666
  • Evalue 2.30e-188

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Taxonomy

GWE1_Thiobacillus_62_9_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1575
TTGCCCGGAATCCAATTGGCTAAAATCAAATTGAATCTGCTCGGCGCGGCCATGCTTGCGCTGCTCTCCCTCCCGTCGGCGCATGCGGCCGATACCGGAGCGGGAATCCAGACGCTGGAATGGGACGCCGACCCGGACGGCGACGCGTCGGTCGGCGAAGCCACACCCGAAACCGCCAGTGCGGACGACGTCTGGGACCGTATCCGCAGCGGATTCAAGATCGACGGCGACACCTCGGGAAATCCGCTCGTCGCCCTGCATGAATCCTGGTACGCCGCCCGGCCGGACTACGTGCGCCGCATGCTCGATCGTTCGCGCCGCTACCTGTTCCATATCGTTCAGGAACTCGATCGCCGTGCCATGCCGATGGAAATCGCCCTGTTGCCGATGGTCGAAAGCGCCTTCAATCCCGCCGCCGAATCGCCTTCCGCGGCGTCCGGAATCTGGCAGTTCATCCCGTCCACCGGCCGTCACTATGGGCTCCGCCAGGACACCTGGTACGACGGCCGCCGCGACTTTACCGCCGCCACCGAAGCCGCGCTCGATTACCTGGGCAAGCTCTACCTGGATTTCGGCGACTGGAAACTGGCACTGGCGGCATACAACTGCGGCGAAGGGTGCGTCGCCCGCGCCATCGAAAAGAATGTCCAGCAAGGTCTGCCGACCAATTACGCCAGTCTGCCCCTGCCCAGTGAAACCCGGCATTACGTGCCCAAGCTCCTCGCCATCAGAAACCTGATCAGCCATCCGGAACACTACGGGATCGTCATCGACACGCTTCCCAACCAGCCCTATTTCAGACAGGTCATCCTGCGGTCCGCGAGCATGGACATCCGTTCCGCTGCCCGGCTGGCAGGCATCAGCAGCGATGAATTCATCGCCCTCAACGCCGCCTTTCCACGCAAGCTCATCCGCTCCGACGCGCCGGTCAACCTGCTGGTACCGGTTGCCAGAACCGACGCTTTCCAGCGCAACCTGCAAACGGGCAGCTGGGATTCCTGGCAACCTTATTCCGCCCAAAAAGGCGCGCGCCCCGCGGCCATTGCGAGACAATACGGAATCGATCTCGCCAGGCTGGAAGAACACAACCAGCTTCATGTGAAGCACGGCAAACTGGTGCGCGATCAGACCATACTGGTGCCCGTCAGGAACCACGGCGCGATCATGGAAAAAACCAGTACCGTCCCGCCCGCCGCCGCCGCGCCAACCCGTATCGAAGTACAACGAGGCGACACCTTGTTCAGCATCGCCCGCCGTTACGGTCTCACCGTCGCCGCGCTCGGCGACGCCAATCCCGGGCTTGATGACCGTCTCACGATCGGCCAGACCCTGCTGCTCCCCACGGGAGCGGGGGCGGACCAGGGAGACGCCGCCCCCCTCCAATCCGTTGCGTTCACGCCCCGCATCGCTACATCGGCCATCCCGTCACGCTATATCGTCCAGCAGGGCGACACGCTAAGTGCCATCGCTCGCCGCTTCGATGTCAGCCTGACCAATCTCAGGCGATGGAATCCCGTTTTCAGCAAAAACAGCACGGTCCATGCAGGGCAGCAGATGATCGTCAGGAACCCCTGA
PROTEIN sequence
Length: 525
LPGIQLAKIKLNLLGAAMLALLSLPSAHAADTGAGIQTLEWDADPDGDASVGEATPETASADDVWDRIRSGFKIDGDTSGNPLVALHESWYAARPDYVRRMLDRSRRYLFHIVQELDRRAMPMEIALLPMVESAFNPAAESPSAASGIWQFIPSTGRHYGLRQDTWYDGRRDFTAATEAALDYLGKLYLDFGDWKLALAAYNCGEGCVARAIEKNVQQGLPTNYASLPLPSETRHYVPKLLAIRNLISHPEHYGIVIDTLPNQPYFRQVILRSASMDIRSAARLAGISSDEFIALNAAFPRKLIRSDAPVNLLVPVARTDAFQRNLQTGSWDSWQPYSAQKGARPAAIARQYGIDLARLEEHNQLHVKHGKLVRDQTILVPVRNHGAIMEKTSTVPPAAAAPTRIEVQRGDTLFSIARRYGLTVAALGDANPGLDDRLTIGQTLLLPTGAGADQGDAAPLQSVAFTPRIATSAIPSRYIVQQGDTLSAIARRFDVSLTNLRRWNPVFSKNSTVHAGQQMIVRNP*