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SCNpilot_expt_500_bf_scaffold_1041_13

Organism: SCNPILOT_EXPT_300_BF_Thiobacillus_SCN1_62_76

near complete RP 52 / 55 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: comp(11740..13902)

Top 3 Functional Annotations

Value Algorithm Source
oligopeptide ABC transporter periplasmic protein id=12493490 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 98.6
  • Coverage: 721.0
  • Bit_score: 1462
  • Evalue 0.0
  • rbh
Oligopeptide ABC transporter periplasmic component {ECO:0000313|EMBL:AAZ97624.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.3
  • Coverage: 713.0
  • Bit_score: 1240
  • Evalue 0.0
oligopeptide ABC transporter periplasmic protein similarity KEGG
DB: KEGG
  • Identity: 83.3
  • Coverage: 713.0
  • Bit_score: 1240
  • Evalue 0.0
  • rbh

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Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2163
ATGGTGCGCATGGGAGCGATTTTATTGAAGACAGGTCTGTTGGCGCTGGGCCTGGGCCTGATCGCAGGCTGCTCCGGCAGCTGGAACAATCCTTATCCCGGCAGCGATGCGCACGCCAACGTGTTGTACAGCGCGTTTTCCGAACGTCCCAAGCATCTCGATCCGGCACGCTCCTACAGTTCGAATGAAGCCGAATTTACCGGACAGATTTACGAACCGCCCCTGCAATACCATTTCCTCAAGCGCCCGTATGCGCTGATTCCGCTGACCGCCGAAGCCGTGCCCCGGCCGCGCTATTTCGACGCGGCAGGCAGACCGCTCGCGGACGACGCCCCTTCGGCCGCCATCGCCGAAAGCGTATACGAAATCCGGATTCGCCCGGGTATCCGCTATCAGCCGCATCCGGCATTCGCCCGCGACGCGGCGGGCCATTATCGTTATCTTGCGCTGGACTCGGATGCGCTGGCGGGAAAAAGACAGATCAGCGATTTCGCGCACAGGGGTACCCGCGAACTCGTCGCGGCCGACTACGTCTATCAGCTCAAGCGGCTGGCGAATCCCCGCGTGAGCTCACCGATTTTCGGGCTGATGTCCGAGCACATTGTCGGCCTGAAAGCGCTTGGCGACGCCCTGCAGAAGGCCTCCACGGCGCATCCCGCGGCGGAGCTGAATCTGAACGATTTTCCGCTGGCGGGCGCGGAAGTGGTGGATCGCTACACGTACCGGATCCACATCAAGGGAAAATACCCGCAATTCATCTACTGGCTGGCGATGCCTTTTTTTGCGCCGGTTCCGTGGGAAGCCGATGTCTTTTACGCGCAGCCCGGCATGGCGGACCGCAATCTCACGCTCGACTGGCAGCCGGTCGGAACCGGCCCCTACTACCTGGCGGAGAATGATCCCAACCGCCGCATGGTGCTGAAAAAAAATCCCTACTTCCATGGCGAGTCCTATCCCGCGGACGGCGATGCGGCGGATCGTCAGGCGGGGCTACTGGCGGATGCCGGCAAGCCGCTGCCGTTCGTGGACGAGGCCGTGTTCAGCCTGGAAAAGGAAACCATTCCCTACTGGAGCAAGTTCCTGCAGGGCTATTACGATAGCTCGGGCATCAGTTCGGACAGCTTCGACCAGGCCGTACAGTTCTCGGCGGGCGGCGATCCGCGGCTGACCGACAGCATGCGGGAGAAGGGTATCCATCTCGTGACTGCGGTAGCGGCTTCGATCTGGTACGTGGGGTTCAACATGCTCGATCCGGTGGTGGGCGGTCAGGGTGAGGATCGCCGCAAGCTGAGGCAGGCCATCTCCATCGCGTTCGACTACGACGAATTCATTTCCATTTTCCTGAACGGCCGCGGTATTCCGGCGCAGGGACCGATCCCGCCCGGCCTGTTCGGATACGTCGATGGCGTGGCAGGCTTGAATCCGTACGTGTACGAAGCGCAAGGCGGCAAGATCGTCAGACATCCCATCGAGATGGCGAAAAAACTGCTGGCCGAGGCGGGCTATCCCAATGGCCGCAACGCCCGGACCGGCGAGCCGCTGGTGCTCTATTTCGACACCATGGCGAGCGGCCCCGACACCAAGTCGCGGCTCGACTGGATGAAGAAGCAGCTCGACAAGCTCAACGTGCAACTGGTCGTGCGCGGCACGGATTACAACCGCTTCCAGGACAAGATGCGCAAGGGCAACGCGCAGTTGTTCGAATGGGGCTGGAATGCCGATTATCCCGATCCGGAAAATTTCTTCTTCCTGCTGTATGGTTCGAACAAGAAAGTGGCCACCGGCGGCGAGAATGCCGCCAACTATGACAATCCGGAATTCGACCGCCTGTTCGAGCGGATGAAGGACATGGACAACGGACCCGAACGCCAGCAGGTGATCAATGCCATGCTCGGGATCGTGCGCCGTGACGCGCCCTGGATCTTTGCCTACTACCCCAAATCCTTTGGCCTGCGCCATGACTGGGTACATAACGTCAAGCCCAACCTGATGGCCAACAATACGCTCAAATACCGTCGTATCGACCCCGACCTGCGGGCAGTCCGGCGTGCGGAATGGAACCATCCCGTACTGTGGCCGATCGTGCTGCTGGCGGGCGGGCTGGTTGCCCTCGTCGCGCCGGCCGCGATGGCCTGGCGGCGGCGTGAAAGAACGACTGCCTGA
PROTEIN sequence
Length: 721
MVRMGAILLKTGLLALGLGLIAGCSGSWNNPYPGSDAHANVLYSAFSERPKHLDPARSYSSNEAEFTGQIYEPPLQYHFLKRPYALIPLTAEAVPRPRYFDAAGRPLADDAPSAAIAESVYEIRIRPGIRYQPHPAFARDAAGHYRYLALDSDALAGKRQISDFAHRGTRELVAADYVYQLKRLANPRVSSPIFGLMSEHIVGLKALGDALQKASTAHPAAELNLNDFPLAGAEVVDRYTYRIHIKGKYPQFIYWLAMPFFAPVPWEADVFYAQPGMADRNLTLDWQPVGTGPYYLAENDPNRRMVLKKNPYFHGESYPADGDAADRQAGLLADAGKPLPFVDEAVFSLEKETIPYWSKFLQGYYDSSGISSDSFDQAVQFSAGGDPRLTDSMREKGIHLVTAVAASIWYVGFNMLDPVVGGQGEDRRKLRQAISIAFDYDEFISIFLNGRGIPAQGPIPPGLFGYVDGVAGLNPYVYEAQGGKIVRHPIEMAKKLLAEAGYPNGRNARTGEPLVLYFDTMASGPDTKSRLDWMKKQLDKLNVQLVVRGTDYNRFQDKMRKGNAQLFEWGWNADYPDPENFFFLLYGSNKKVATGGENAANYDNPEFDRLFERMKDMDNGPERQQVINAMLGIVRRDAPWIFAYYPKSFGLRHDWVHNVKPNLMANNTLKYRRIDPDLRAVRRAEWNHPVLWPIVLLAGGLVALVAPAAMAWRRRERTTA*