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SCNpilot_expt_500_bf_scaffold_1332_16

Organism: SCNPILOT_EXPT_300_BF_Thiobacillus_SCN1_62_76

near complete RP 52 / 55 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: comp(13244..13585)

Top 3 Functional Annotations

Value Algorithm Source
putative transcriptional regulator, AbrB family id=12495499 bin=THIO_HI species=uncultured Thiohalocapsa sp. PB-PSB1 genus=Thiohalocapsa taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 83.0
  • Bit_score: 159
  • Evalue 1.90e-36
putative transcriptional regulator, AbrB family similarity KEGG
DB: KEGG
  • Identity: 37.3
  • Coverage: 83.0
  • Bit_score: 64
  • Evalue 2.00e-08
Tax=RBG_16_Betaproteobacteria_58_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 65.4
  • Coverage: 81.0
  • Bit_score: 112
  • Evalue 4.80e-22

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Taxonomy

RBG_16_Betaproteobacteria_58_11_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 342
ATGAATTTCGGCATGCAGGGCTTGGCGGTGGATGAATACCGACTGTTAGCCTATTATCTGAATAACGGAATTTCTGTATTACGGAGAATCAAAATGCGTGAAACGCTCATCGTTTCCAATCGCGGCCAGATCACCCTGCCGGCCGACATGCGCAAGCAGCTCGGCATCGCGCCCGGCAGCGCCGTGATTATCGAAACACGTAACGGCGAGCTTGCCCTGAAGCCCGCAGCCGTGCTGGAGATCGAACGCTATACCGACGAACAGATTGCCCAGTGGGACAGCGAGGACAAGCTGACCGCCGCCGAACGCAAGCGCATTCTGGCCCGGCTGCAGAAAACCTGA
PROTEIN sequence
Length: 114
MNFGMQGLAVDEYRLLAYYLNNGISVLRRIKMRETLIVSNRGQITLPADMRKQLGIAPGSAVIIETRNGELALKPAAVLEIERYTDEQIAQWDSEDKLTAAERKRILARLQKT*