ggKbase home page

SCNpilot_expt_500_bf_scaffold_1332_22

Organism: SCNPILOT_EXPT_300_BF_Thiobacillus_SCN1_62_76

near complete RP 52 / 55 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: comp(18719..19942)

Top 3 Functional Annotations

Value Algorithm Source
signal transduction protein id=12495492 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 99.5
  • Coverage: 408.0
  • Bit_score: 794
  • Evalue 7.00e-227
  • rbh
signal transduction protein similarity KEGG
DB: KEGG
  • Identity: 80.8
  • Coverage: 407.0
  • Bit_score: 653
  • Evalue 3.50e-185
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 91.9
  • Coverage: 408.0
  • Bit_score: 738
  • Evalue 6.40e-210

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYA1_FULL_Hydrogenophilales_63_33_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1224
ATGCGCCGCGAGGCCATGCTGGGCCGTGATCAGCGCGTGGCGGGCTATACCTTCATGCTGCGCCGGGCAAGCGACGAACACGTCGATCCCGGCCTGACCGATGTGCAGCGTCTCTACGACGAAACCTTGCTGGGCAACCTGCAGCGCATGGATATTGCGCGTCTCCTCGGCCAGCGGCTGGCATTCGTGCCGATTGCGCCGTCGACCCTGAATCATCCGCTCATCGAGCAATGGCCTGCCGCCGGCACGGTCTGGCAGCTGAATATCGATACCCGGGCGCCGGCAGACGATGCTCTGGCGGCCCGGCTGGGCGAGTTGAGAGCGCGCGGATTCAGCTTTGCGGCGCAGGCGAACGCGGTCATCCGTCCCGAACACCACGGGCTTCTGCCGCATGTGGATTATGTGGTGATGGATGTCAGCAGCGAGGATATTCCCACCATCACCGCCCAGATTGCCGCCGTGTCGAAACTGGCCGCCGGCAAGCGCTTTGTCGCGACCGACGTGCAGACGCTGGAAACATTTCACATGTGCCACAAGCTCCAGTTCGCGCTGTTCATGGGGCCATTCATCACCCGGCGGGAAAATCTGGGGAACCCGGTCATGGGGCCGTCACGCGCCAAGGTGCTGGACCTGATGAACCGGGTGCGTACCGGGGCCGAACAGCCCGAACTGGCGGCCCAGTTCCGGCACGATCCGGCGCTGTCGGTGCGACTGCTGCGCTACGTCAATTCCCCCGGCATGGGGCTGATGAACAAGGTCGGCGGTATCGAGCAGGCCTTGATGGTGATGGGCCAGGACAAGCTGTATCGCTGGCTGACGCTGATCCTGTTCACCGGCGGCCAGACCCAGGAACTCGACCAGGCCGTACTGGAAAATGCGCTGGTGCGCGGCCGGGTGGCGGAACAACTGGCTGGCCGCGCCCTGTTTGCCAAGGCACGCGACGAGATTTTTGTCGCCGGATTGTTTTCCTTGCTGGACGTGGTGATGCGCATGCCGATGGAGCAGGTGCTGAAGCAGATCAGCCTGCCGGCCGAGATCACCGAGGCCATCGTCTCGCAGCGCGGTCCCTATGCCCCCTACCTGGCGCTGGCCATCGCTTGCGAGCAGGACGATCAGAACAGCATCGAAGCCCTGGCCAAACAGATCGGGCGCGATGTGGCCGACATCAACGGCGTGCACATGGATGCGCTGCTATGGGCGCAGCCGCTCTCCTCCGACGTATGA
PROTEIN sequence
Length: 408
MRREAMLGRDQRVAGYTFMLRRASDEHVDPGLTDVQRLYDETLLGNLQRMDIARLLGQRLAFVPIAPSTLNHPLIEQWPAAGTVWQLNIDTRAPADDALAARLGELRARGFSFAAQANAVIRPEHHGLLPHVDYVVMDVSSEDIPTITAQIAAVSKLAAGKRFVATDVQTLETFHMCHKLQFALFMGPFITRRENLGNPVMGPSRAKVLDLMNRVRTGAEQPELAAQFRHDPALSVRLLRYVNSPGMGLMNKVGGIEQALMVMGQDKLYRWLTLILFTGGQTQELDQAVLENALVRGRVAEQLAGRALFAKARDEIFVAGLFSLLDVVMRMPMEQVLKQISLPAEITEAIVSQRGPYAPYLALAIACEQDDQNSIEALAKQIGRDVADINGVHMDALLWAQPLSSDV*