ggKbase home page

SCNpilot_expt_500_bf_scaffold_1332_23

Organism: SCNPILOT_EXPT_300_BF_Thiobacillus_SCN1_62_76

near complete RP 52 / 55 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: comp(20371..20949)

Top 3 Functional Annotations

Value Algorithm Source
cytochrome c family protein id=12495491 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 97.9
  • Coverage: 193.0
  • Bit_score: 372
  • Evalue 3.10e-100
  • rbh
cytochrome c family protein similarity KEGG
DB: KEGG
  • Identity: 75.1
  • Coverage: 193.0
  • Bit_score: 286
  • Evalue 5.40e-75
Cytochrome c family protein {ECO:0000313|EMBL:AAZ96008.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.1
  • Coverage: 193.0
  • Bit_score: 286
  • Evalue 2.40e-74

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 579
ATGAAAGCGACCGTCCTGTCCTTGTCCGCCCTGGCCCTGCTGGCCGGCTGTGCGAGCGGCCCGAGCGCCGAACAGCAGGCCGCCATGGCGACCGACGCCCGCAAGGCGGCGGGCACCCTGATCCAGCAACTGGGCGGCGAACTGAAAGCCGCGCTTGCCGAAAAAGGCCCGGACGGCGCGATCGGCGTCTGCAAGCAACGTGCGCCGCAGATCGCGGCCGAGGTCTCCCGACAGTCCGGCTTCGTGGTCACGCGCGTCAGCCCGAAGAACCGCAACCCCGCCGGTGTGCCCGATGCCTGGGAAGCGCAGGCGCAGGCCGGCCTCGAGAAGCGCTTGGCGGCGGCCGAGAAGCCCGAGACACTGGATACCTGGCAGGTCGTCAGCACGCCGACGGGCAAGCAGTTCCGCTACGCGAAGGCGCTTCCCGTCCAGCCGGCCTGCCTGACCTGCCATGGCGATCCGGCGAAGATGGCCGACGGGGTGAAGGCGCGTCTGGCGGCAGACTATCCGCTCGACAAGGCGACCGGCTACGCGCCGGGCATGCTGCGCGGCATCGTGTCGGTCAAGCGCGACCTGTAG
PROTEIN sequence
Length: 193
MKATVLSLSALALLAGCASGPSAEQQAAMATDARKAAGTLIQQLGGELKAALAEKGPDGAIGVCKQRAPQIAAEVSRQSGFVVTRVSPKNRNPAGVPDAWEAQAQAGLEKRLAAAEKPETLDTWQVVSTPTGKQFRYAKALPVQPACLTCHGDPAKMADGVKARLAADYPLDKATGYAPGMLRGIVSVKRDL*