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SCNpilot_expt_500_bf_scaffold_1190_13

Organism: SCNPILOT_EXPT_300_BF_Thiobacillus_SCN1_62_76

near complete RP 52 / 55 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: comp(9669..11612)

Top 3 Functional Annotations

Value Algorithm Source
diguanylate cyclase id=12498631 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 98.9
  • Coverage: 648.0
  • Bit_score: 1260
  • Evalue 0.0
  • rbh
diguanylate cyclase similarity KEGG
DB: KEGG
  • Identity: 59.7
  • Coverage: 638.0
  • Bit_score: 757
  • Evalue 2.80e-216
Putative diguanylate cyclase (GGDEF domain) with PAS/PAC sensor domain {ECO:0000313|EMBL:AAZ97364.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.7
  • Coverage: 638.0
  • Bit_score: 757
  • Evalue 1.20e-215

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Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1944
ATGTTTGATCGGAAGGCTGTCGCGTGGATCGTGCTGGGGCTGACAGTGATCCTGACTATCGGCTTATGGCGCTATTCCACGATGGAATTTGCGCGGCGTGCCAACGAAATTTTCAGGGACGCCACCGAAAAGCAGGCGGCGCATCTGCTGGACCGCATGCAGGATTACGAACAGGTCCTGCGGGGTGGCGCGGCACTCTTCGCCGCGAGCGATTCAGTCAGTCGCGAGGAATGGCACACCTATGTCGGGATGCTCAAACTGGATCATTCCCTGCCCGGCATTCAGGGCACCGGGTTTGCCTTGATGATTCCGGAAAGTGCCCGCCGCGCACATGAACACAGCGTGCGCCGCGAAGGATTTCCCGCTTACGCGATCCATCCGGCGGGCGATCGCGCCCTGTACAGCAGTATTGTGTATCTTGAGCCATTCAGCGGATCCAACCTGCTCGCATTCGGTTACGACATGTATTCGGATCCCGTTCGCCGCGAAGCGATGGAACGCGCACGCGATAGCGGCCAACCTGAAATATCGGCAAAAATCACGCTCGTCCAGGAAGCGGGGCAGCGGAAACAGCCCGGTTTCCTGATCTATCTGCCGATCTATCGCAACGGCATGCCGCACGACACTGTGGCTGCACGGCGGCGTGCGCTGTTCGGCTTCGTGTACAGCCCGTTCCGGGTGGCCGACCTGATGAACAAGGTATTGAACGATCCCGGGCGCGAATTTGAAATCGCCTTGTTTGACGATCGGGCCACAGCGGACAACCTGCTGTTCTCTTCTGCCGGATCCGGACGCGCCTCGCGTTATGCGGCCGACCATGTCCTGTCGATCGGTGGCCGCCGCTGGATCGCCCGTTTCAAAAGCAATCCCGCTTTCGAAGCGAGAACGGAAAGTGCCCAGCCCCTCACGATTCTCTTTGGCGGTCTGCTGTTCAGCATGCTGTTCTTTTACGTCCTCTACATGAATGCGCGGCACCGGCGGGCGATGCACGATGTAGCGGAAAAACTCCAGGCCAGTCTCGACAACTTCAGGGCGCTCGTCGAAAATGTACCGGGCGCCGTGTTCCGGATTGAATTGGGGGCGTCCTCACCGATGCAGCAGATCAGCCAGGGCATTCATGCGTTGACGGGCGAACCGCCTGAACGCTTTGTTTCCGGCGCGATTTCGTATGCCGGACTGATTCATCCTCACGATCGTTCCCTGGTAAGCAGGGCGATTACCCAGGCGATCGCCACACGTGGCGTCTACACGATCGAATACCGCATCAGAACCGTCGAAGGGCGCCTCCGCTGGGTCAGCGAACAAGGCCGCGTCACCTCCAACCAGTCCGGTCATGCACAATGGCTGGATGGCCTCATTCTCGACATCAGCGAGCGCAAGGCCGCCGAAATCATGATCCGCGATCTGGCCTACAACGACCCCTTGACTGAATTGCCCAACCGTCGCCTGTTGCTGGACCGCCTGAAGCATCAACTCGCGGCCAGTAGCCGCAGCGGCAGATACGGGGCGCTGTTGTTCATCGACATGGATCATTTCAAGGCCATCAATGACACTTTCGGCCACGAAGCGGGCGATCAGGTGCTCAAGGAAGTGGCACGGCGTCTGCTCGCCAACGTCAGGGAGAGCGATACGGTTGCCCGATTTGGCGGAGACGAATTCGTGGTCATCCTCGACAGCCTGGGCGACACGGCCGCCGTCGCTGCCGCGGAGGCGAATGAATTGGGCCACAAGATACTGGACAAGCTTGCCCAGCCCTACCGGTTGGCTGGGGATTTCTGCACCAGTACGCCCAGCATAGGCATCGTCATCTTCTGCGGGCACGCGGCAAGCATGGATCAGTTGATCAAACGGGCCGACACGGCCATGTACGAGGCCAAATCGGCCGGGCGCAACCGGATAGCCTTCCATTCGGATCTGCCCACTACGGCGACCGGCGCAGAGTAG
PROTEIN sequence
Length: 648
MFDRKAVAWIVLGLTVILTIGLWRYSTMEFARRANEIFRDATEKQAAHLLDRMQDYEQVLRGGAALFAASDSVSREEWHTYVGMLKLDHSLPGIQGTGFALMIPESARRAHEHSVRREGFPAYAIHPAGDRALYSSIVYLEPFSGSNLLAFGYDMYSDPVRREAMERARDSGQPEISAKITLVQEAGQRKQPGFLIYLPIYRNGMPHDTVAARRRALFGFVYSPFRVADLMNKVLNDPGREFEIALFDDRATADNLLFSSAGSGRASRYAADHVLSIGGRRWIARFKSNPAFEARTESAQPLTILFGGLLFSMLFFYVLYMNARHRRAMHDVAEKLQASLDNFRALVENVPGAVFRIELGASSPMQQISQGIHALTGEPPERFVSGAISYAGLIHPHDRSLVSRAITQAIATRGVYTIEYRIRTVEGRLRWVSEQGRVTSNQSGHAQWLDGLILDISERKAAEIMIRDLAYNDPLTELPNRRLLLDRLKHQLAASSRSGRYGALLFIDMDHFKAINDTFGHEAGDQVLKEVARRLLANVRESDTVARFGGDEFVVILDSLGDTAAVAAAEANELGHKILDKLAQPYRLAGDFCTSTPSIGIVIFCGHAASMDQLIKRADTAMYEAKSAGRNRIAFHSDLPTTATGAE*