ggKbase home page

SCNpilot_expt_500_bf_scaffold_16262_1

Organism: SCNPILOT_EXPT_300_BF_Thiobacillus_SCN1_62_76

near complete RP 52 / 55 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: comp(2..1249)

Top 3 Functional Annotations

Value Algorithm Source
cbbM; ribulose bisphosphate carboxylase (EC:4.1.1.39); K01601 ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] id=12493636 bin=THIO_HI species=Limnohabitans sp. Rim47 genus=Limnohabitans taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 99.8
  • Coverage: 416.0
  • Bit_score: 850
  • Evalue 6.40e-244
ribulose bisphosphate carboxylase (EC:4.1.1.39); K01601 ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] similarity KEGG
DB: KEGG
  • Identity: 92.1
  • Coverage: 416.0
  • Bit_score: 793
  • Evalue 2.90e-227
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 94.0
  • Coverage: 416.0
  • Bit_score: 805
  • Evalue 4.30e-230

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Burkholderiales_67_14 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1248
ATGGATCAATCCGCACGTTATGCCGACCTCAGCCTCAAGGAAGAAGACCTGATCAAGGGCGGCAAGCACATTCTCGTCGCCTACAAGATGAAGCCCAAGGCCGGCCACGGCTACCTGGAAGCGGCCGCCCACTTCGCCGCCGAGTCCTCGACCGGCACCAACGTCGAAGTGTCCACCACCGACGAATTCACCAAGGGCGTCGACGCGCTGGTGTACCACATCGACGAGGCCACCGAGGACATGCGGATTGCCTACCCGCTGGACCTGTTCGACCGCAACGTCACCGACGGCCGCATGATGATCGTCTCCTTCCTGACGCTGGTGATCGGCAACAACCAGGGCATGGGCGACATCGAGCACGCCAAGATCCACGACTTCTACGTGCCCGAGCGCGCCATCCAGCTGTTCGACGGTCCCGCCAAGGACATCTCCGACATGTGGCGCATCCTCGGCCGCCCGGTGGTCAACGGCGGCTACATCGCCGGCACCATCATCAAGCCCAAGCTGGGCCTGCGCCCCGAGCCGTTCGCCCACGCGGCCTACCAGTTCTGGCTGGGCGGCGACTTCATCAAGAACGACGAACCCCAGGGCAACCAGGTATTCGCGCCGATGAAGAAGGTGATCCCGCTGGTGGCCGACGCGATGAAGCGCGCACAGGATGAAACCGGCCAGCCCAAGCTGTTCTCCGCCAACATCACCGCCGACGACCACTATGAAATGTGCGCCCGCGCCGACTACATCCTGGAAACCTTCGGCGCCGACGCCGACAAGGTGGCCTTCCTGGTCGACGGTTTCGTCGGCGGTCCCGGCATGATCACCACCGCCCGCCGTCAGTATCCCAACCAGTATCTGCACTACCACCGCGCCGGCCACGGCATGATCACCTCGCCGTCGGCCAAGCGTGGCTACACCGCCTTCGTGCTGGCCAAGATCTCGCGCCTGCAGGGGGCCTCGGGCATCCACGTCGGCACCATGGGCTACGGCAAGATGGAAGGCGAGGCGGACGACAAGCTGATCGCCTACATGATCGAGCGCGACGAGTGCCAAGGCCCGGTCTACTTCCAGAAGTGGTACGGCATGAAGCCCACCACCCCGATCATCTCCGGCGGCATGAACGCGCTGCGTCTACCCGGCTTCTTCGAGAACCTCGGCCACGGCAACGTCATCAACACCTCCGGCGGCGGCTCCTACGGCCACATCGACAGCCCGGCGGCCGGCGCGATCTCGCTGCGCCAGTCGTACGAGTGC
PROTEIN sequence
Length: 416
MDQSARYADLSLKEEDLIKGGKHILVAYKMKPKAGHGYLEAAAHFAAESSTGTNVEVSTTDEFTKGVDALVYHIDEATEDMRIAYPLDLFDRNVTDGRMMIVSFLTLVIGNNQGMGDIEHAKIHDFYVPERAIQLFDGPAKDISDMWRILGRPVVNGGYIAGTIIKPKLGLRPEPFAHAAYQFWLGGDFIKNDEPQGNQVFAPMKKVIPLVADAMKRAQDETGQPKLFSANITADDHYEMCARADYILETFGADADKVAFLVDGFVGGPGMITTARRQYPNQYLHYHRAGHGMITSPSAKRGYTAFVLAKISRLQGASGIHVGTMGYGKMEGEADDKLIAYMIERDECQGPVYFQKWYGMKPTTPIISGGMNALRLPGFFENLGHGNVINTSGGGSYGHIDSPAAGAISLRQSYEC