ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

SCNpilot_expt_500_bf_scaffold_2312_8

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 46 / 55 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: comp(7292..8998)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 37.9
  • Coverage: 557.0
  • Bit_score: 309
  • Evalue 3.00e-81
  • rbh
hypothetical protein id=24657759 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber similarity UNIREF
DB: UNIREF100
  • Identity: 37.9
  • Coverage: 557.0
  • Bit_score: 309
  • Evalue 9.50e-81
  • rbh
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 47.7
  • Coverage: 533.0
  • Bit_score: 466
  • Evalue 6.50e-128

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Gammaproteobacteria_63_22 → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1707
ATGAATCTGTCGCGTCGTCTTCGTCTCGTCGTTCTGGCTCTCGTCGCCTTCGTCTGCGGAATCCTGTGGCCGGGCCTGCTGACCGGCGCCCAGGCGCGCGAAGCCACCCCGATGCAAACCATCGCCGGCCTCGGCAGCATCTCGTTCCCCACGTCGACCCATTCGACGGCTGCGCAAACCGCCTTCCTGCGCGGCGCGCTGCTGTTGCACCTGTTCGAGTATCCGGATGCCGCCAAGGCATTCCGCGAGGCCCGGCAACTGGACCCGGGCTTCGCCATGGCCTACTGGGGTGAAGCGATGACGTACAACCACGGCATCTGGAACCAGCTCGATGCCGATGCCGGTCGCGCGGCACTCGAACGGCTCGGCCCTACCCCGGCCGCGCGCGCCGCCAAGGCGCCGACGCCGCGCGAGAAGGCCTATCTCGCCGCCGTGGAAATCCTGTATTCCGGCCACGGCACCAAGCCGGAACGCGACGCGCAGTACGACCAGGCGATGGAGCGATTGGCCAGGACCTGGCCGCATGACAACAACGCCCAGCTCTTCCACGCGCTGGCGCTGATGGGACGCAGCGAAGGCGTGCGCGACATCCCGGCCTATCTGCGCGCCGGTGCCATTGCCGAGCGCATCTTCCGCCTGAACCCGCAGGACCCCGGCGCGGCGCATTACTGGATTCACGCGATGGACGATCCCGCGCACGCCGCCGGCGCGCTCGAGCCTGCGCACGCGCTGTCGAAGATCTCGCCCGAGGCCGCCCACGCCCAGCACATGACGTCGCACATCTTCATGGCGCTCGGCTTGTGGGATGACGTGGCGAAAGCCAACGAGGTGGCGATGCGCGTGGTCAATGCCCAGGCCAAAGCCGCCGGCCGCCCGCCCGCCGAATGCGGTCACTACATGGAGTGGCTGGAGTACGCCTACTACCAGCAGGGTCGTTTCCGCGATGCCGAAAGGGCGCTGCAGGCATGCCGGCAGTCGATCGAGCCCTCGATAGCCTGGGCCAACGCCCACGCCGACCGGCTGGCCACGATGCAAAGCACGCCGACGAAGTTCGCGCAAATGCTCAACAAGTCGCTGTTGCAGATGCGCGCGATCGCCGTGGTCGAATCCGGCGACGGCAACGGCCCGGCCGCGCACACCACGGTGGATACGACCGGCATGGGCCCGGACGCCGGCTGGAACGATTTCACCGAGGGCTATGCCGCGATCGAACGCCACGACCTGCCGGCTGCGCAGAAATCGCTGGCCGCGCTGTCGGCGCGGCACGCCGGCAGCGAGACCTCCGGCGACGCCCAGACGACCAGCTACCTGGCCATCCTCCGGGAGGACCTCGGCGGCATGCTGGCGATCGGCGAGGGCAAGCCGCAGAGTGGCCTGGATGCCATCCGCCGCGCAGCCCGCCGCTACGAAACACTGGCGTTCGACTTCGGTCCGCCGGTGCCGATCAAGCCGCCACACGAACTGCTGGGCGAACAGTTGCTCAGGCAAGGCAAGGCGACCGAGGCGCGCGCGGCATTCGGGACCGCACTGAAAAGCGCACCCCGCCGCACCCGGTCCCTGCTCGGCCGCGCCCGCGCGGAATCGGCCAGCGGCGACACCGCGGCAGCCACCGCCACCTACAAGGAACTGATGACCATCTGGCACAGCGCCGATGCGGATCTGCCGGCGCTGGCCGAAGCGAAGGGGTTCGTCGCGGCACATCCGTGA
PROTEIN sequence
Length: 569
MNLSRRLRLVVLALVAFVCGILWPGLLTGAQAREATPMQTIAGLGSISFPTSTHSTAAQTAFLRGALLLHLFEYPDAAKAFREARQLDPGFAMAYWGEAMTYNHGIWNQLDADAGRAALERLGPTPAARAAKAPTPREKAYLAAVEILYSGHGTKPERDAQYDQAMERLARTWPHDNNAQLFHALALMGRSEGVRDIPAYLRAGAIAERIFRLNPQDPGAAHYWIHAMDDPAHAAGALEPAHALSKISPEAAHAQHMTSHIFMALGLWDDVAKANEVAMRVVNAQAKAAGRPPAECGHYMEWLEYAYYQQGRFRDAERALQACRQSIEPSIAWANAHADRLATMQSTPTKFAQMLNKSLLQMRAIAVVESGDGNGPAAHTTVDTTGMGPDAGWNDFTEGYAAIERHDLPAAQKSLAALSARHAGSETSGDAQTTSYLAILREDLGGMLAIGEGKPQSGLDAIRRAARRYETLAFDFGPPVPIKPPHELLGEQLLRQGKATEARAAFGTALKSAPRRTRSLLGRARAESASGDTAAATATYKELMTIWHSADADLPALAEAKGFVAAHP*