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SCNpilot_expt_500_bf_scaffold_2312_24

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 46 / 55 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: 27522..28076

Top 3 Functional Annotations

Value Algorithm Source
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.3
  • Coverage: 180.0
  • Bit_score: 284
  • Evalue 1.10e-73
DNA ligase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VX04_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 83.3
  • Coverage: 180.0
  • Bit_score: 284
  • Evalue 8.10e-74
DNA ligase, NAD-dependent similarity KEGG
DB: KEGG
  • Identity: 80.9
  • Coverage: 183.0
  • Bit_score: 277
  • Evalue 3.10e-72

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 555
GTGTTCAGTGACGAGCGCGCGCCTTCGCCGCAGCTGCGCGAGCGGCTGAATCTGGGCGTGCTGCTGGACATGGCCGGGATCAACAAGCTCGGCCCCAAGAGCAGCAAGCTGCTGGCGCAGCATTTCCCCACGCTCGATCGCCTGCTCGCCGCGGGCGCGGCGCACTGGATCACCGCTGGCGTGCCGCAGGCCGCGGCGGCGGCGTTGGAAGCCTTCCTGGCCGATCCCGCTGCAGAGGCTGCGTTGCGCGATGCCGAGGCAGCGATGCACCGCCTGCTCGATGCGATTCCCGCCAGCGCGGCCGTGGCCGCGGCGCCGCTGGACGGGCAGACCTTCGTGCTCACCGGCACGCTGGCCTCGCTCAGCCGCGACGAGGCAAAGGATCGGCTGGAGGCGCTGGGCGCCAAGGTGTCCGGATCGGTCTCGAAAAAGACCAGCGTGGTGGTGGCAGGCGTTGAAGCCGGCTCGAAACTGGACAAGGCGCAGGAGCTTGGCGTGCCGGTCTGGGACGAGGCGCAGTTGCTGGCGTTGCTCGACGAGCACGGGGCGGGTTGA
PROTEIN sequence
Length: 185
VFSDERAPSPQLRERLNLGVLLDMAGINKLGPKSSKLLAQHFPTLDRLLAAGAAHWITAGVPQAAAAALEAFLADPAAEAALRDAEAAMHRLLDAIPASAAVAAAPLDGQTFVLTGTLASLSRDEAKDRLEALGAKVSGSVSKKTSVVVAGVEAGSKLDKAQELGVPVWDEAQLLALLDEHGAG*