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SCNpilot_expt_500_bf_scaffold_3117_18

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 46 / 55 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: 14035..14733

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.0
  • Coverage: 243.0
  • Bit_score: 298
  • Evalue 9.60e-78
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VV60_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 65.0
  • Coverage: 243.0
  • Bit_score: 298
  • Evalue 6.90e-78
RNA methyltransferase, RsmE family similarity KEGG
DB: KEGG
  • Identity: 64.6
  • Coverage: 243.0
  • Bit_score: 297
  • Evalue 4.80e-78

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 699
ATGCGCACCATCCGATTCCACGCCGACCTGCCGCTTGCCGTGGNNNNNNNNNNNNNNNNNNCGCCGGTGGTGCTGTTCAACGGCGACGGCTGCGACTACGCGGCCACCATCGGCAGCATCGACAAGCGCGCGGTGCGGGTACAGGTGACGGCGTGCAGCCCCGTGTACAACGAGTCGCCACTGCCGCTGCTGCTCGCCCAGGGCATCGCGCGCGGCGACAAGATGGACCTGATCGTGCAGAAGGCCACCGAGCTGGGCGCGACCGGCATCGTGCCGCTGCTGACCGAACGATCGGAAGTGCGCCTGGACGCGGAACGGGCCGCCAAGCGGCTGGCGCATTGGCAGTCGGTGGCGGTCAGCGCCTGCGAGCAGAGCGGCCGCGCACGCATTCCGCGCATCGCGCCGATCCAGCCGCTGGCGGCATGGCTGGGCGGGTTGGCTGACGATGGCGCGCTGCGACTGGCCTTGCTGCCGGGCGCCGAGAAGACGATCGGCGCGCTGCGCTTCGGTGCCGCCGGCGGCGTGCTGGTGATCGGGCCGGAAGGTGGCCTGGGTGAAGCCGACACCCGCGCACTGGCGCAGCACGGCTTCCTCGGCCTGCGCCTGGGCCCACGCATCCTGCGCACCGAGACGGCAGGCCTGGCGGCGCTCAGCGCCTTGCAGGCCTGCCACGGCGATCTGGCGATCGCCGGCGCGTGA
PROTEIN sequence
Length: 233
MRTIRFHADLPLAVXXXXXXXPVVLFNGDGCDYAATIGSIDKRAVRVQVTACSPVYNESPLPLLLAQGIARGDKMDLIVQKATELGATGIVPLLTERSEVRLDAERAAKRLAHWQSVAVSACEQSGRARIPRIAPIQPLAAWLGGLADDGALRLALLPGAEKTIGALRFGAAGGVLVIGPEGGLGEADTRALAQHGFLGLRLGPRILRTETAGLAALSALQACHGDLAIAGA*