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SCNpilot_expt_500_bf_scaffold_3588_7

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 46 / 55 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: comp(6504..7199)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L25 n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2S5_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 89.7
  • Coverage: 232.0
  • Bit_score: 396
  • Evalue 1.80e-107
  • rbh
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00147491}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023359}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.7
  • Coverage: 232.0
  • Bit_score: 396
  • Evalue 2.60e-107
ribosomal protein L25, Ctc-form similarity KEGG
DB: KEGG
  • Identity: 76.4
  • Coverage: 225.0
  • Bit_score: 330
  • Evalue 3.90e-88

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 696
ATGACCCAGACTCATGAAATCAAGGCGCAGAGCCGCAAGGACGAGGGGAAAGGTGCGAGCCGCCGCCTGCGTCGCGCGAGCTTCGTGCCGGCCGTCGTCTACGGTGGCAGCCAGCCGCCGGAAAGCATCCAGATCGAGCACAACACCATCCTGCTCGCCGCCAAGAACGAATGGTTCTTCTCCTCGATCCTCGACCTGAACGTCGATGGCAGGGTGCAGAAGGTGCTGGTGCGCGACTGGCAGAAGCATCCGTTCAAGCAGCTGATGATGCACATGGATTTCCAGCGCATCGACGAGAACGCGAGGCTGCGCGCCAACGTGCCGCTGCATTTCCTGAACAAGGAACTGTCGCCGGCCGGCAAGATGTCCGGCGTGGTGATCTCGCACAACCTGACCGAAGTGGAAGTCAGCTGCCTGCCGAAGGATCTGCCGGCGTTCATCGAGCTGGATCTGGGCGCGCTGCAGGCCGGCGACATCATCCACCTGTCGCAGCTGAAGCTGCCGGCGAACGTGGAACTGCCGGCTTTGCAGCTGGGTGAAGCCCACGACGTCGCCGTGGTGACCGTGAACGCGGTCAAGGAAAGCGCCGCGGATGTCGCGGAAGACGCTGCCGAAGCCGAGGCCGAAGCGACCAAGGCCGCGGCTGCCAAGCCGGGTGCGAAGTCCGACGCCAAGCCGGCTGCCGACAAGAAGTAA
PROTEIN sequence
Length: 232
MTQTHEIKAQSRKDEGKGASRRLRRASFVPAVVYGGSQPPESIQIEHNTILLAAKNEWFFSSILDLNVDGRVQKVLVRDWQKHPFKQLMMHMDFQRIDENARLRANVPLHFLNKELSPAGKMSGVVISHNLTEVEVSCLPKDLPAFIELDLGALQAGDIIHLSQLKLPANVELPALQLGEAHDVAVVTVNAVKESAADVAEDAAEAEAEATKAAAAKPGAKSDAKPAADKK*