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SCNpilot_expt_500_bf_scaffold_3495_7

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 46 / 55 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: comp(8296..9465)

Top 3 Functional Annotations

Value Algorithm Source
Membrane-bound lytic murein transglycosylase D n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VJX4_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 52.9
  • Coverage: 393.0
  • Bit_score: 405
  • Evalue 6.70e-110
Membrane-bound lytic murein transglycosylase D {ECO:0000313|EMBL:EIL87515.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.9
  • Coverage: 393.0
  • Bit_score: 405
  • Evalue 9.40e-110
LysM repeat-containing protein similarity KEGG
DB: KEGG
  • Identity: 58.7
  • Coverage: 332.0
  • Bit_score: 390
  • Evalue 5.30e-106

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Taxonomy

Rhodanobacter fulvus → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1170
ATGAACCGGACGCCCCGACACCTGCTGCTGCCGCTGGCGCTGTCGACAGCGCTGGCCGCCTGCAGCAACATGCCTTCGCAACCGGCACGCGCACCTGTCGCCGTCGTCGCCCCCGCCAGCACGCCACCGGCGGTTGCCGCCAGTGTCGCGACTGCGGCACCTGTACCGGCGGCCGACCTGTGGGATCGACTGCGCAGCAGTTTTGTCATGCCGGATTGCAATGCCGACCCCGCGGTGCTGGCGTGGGCCGGGCGCTACACGCGCAGCCCGGCGCGGTTCGAGGACACCTTGCGCGAGGCGATGCCGCGCCTGGCCTATGTCCAGCAGGTCGCCGAGCAATACGACGTGCCCGGCGAGTTCGCACTGCTGCCGTGGGTGGAGAGCCGTTACCGCCCGGTGCAGGGACGCAGGCACCATGCTGCCGGCATGTGGCAGATCATGCCGGTGACCGCCCGCTCGATGGGCCTGCGCGTGGATCGCCATTACGACGGCCGGCTGGACATACCGGCCGCAGCGCACGCCGTGATGAAGTTGCTGCGGCAATACCACGACCGCTTCCACGACTGGCGCGTGGCCGACTATGCGTACAACGCCGGCGAGTTCAAGATACGCGGGTTGATCAGCCGCCACGGCATGCCGGCGGACAAGCCGGCGATCCCCGACCTGCCGGTACGCCGCGTCACTCGCGAGCACCTGACCCAGTTGCTGGCGATCGCATGCGTGATACGCGAGCCGTCGCGCTTCCAGGTCAGCCTGCCCAGCCTCCCGGAGTCCGAGCACCTGGTGCAGGCACCGGTGACGCATCCCGTCACGGTGGCGCGCGCCGCCGAAATGGCCGGCATGCCGGAATCGGCCCTGCGTCATCTCAATGCGGCATTCCGCGGCAACAAGCTGGATGGGCGAACGGTTTCGCACCTCATGCTGCCGGCCGGTCACGCCGGTCGGTTCGAGCTCGCCATGCTCGATGCCGCCGCGGGCTCCACCACCGCCGCAGCAGACGACGAATCGTCCCGCGGTCCTGACACGCACGTGGTCAGCCCCGGTGAAAGCCTGTGGCAGATTGCGCGCCAGTATTCGACCAGCGTCGCGCACCTGCAGCAACTGAACAACCTGGCCCAAGGCCAGGCGATCCAGCCGGGACAGGTGCTGAAGCTGGGCGACGTCGACTGA
PROTEIN sequence
Length: 390
MNRTPRHLLLPLALSTALAACSNMPSQPARAPVAVVAPASTPPAVAASVATAAPVPAADLWDRLRSSFVMPDCNADPAVLAWAGRYTRSPARFEDTLREAMPRLAYVQQVAEQYDVPGEFALLPWVESRYRPVQGRRHHAAGMWQIMPVTARSMGLRVDRHYDGRLDIPAAAHAVMKLLRQYHDRFHDWRVADYAYNAGEFKIRGLISRHGMPADKPAIPDLPVRRVTREHLTQLLAIACVIREPSRFQVSLPSLPESEHLVQAPVTHPVTVARAAEMAGMPESALRHLNAAFRGNKLDGRTVSHLMLPAGHAGRFELAMLDAAAGSTTAAADDESSRGPDTHVVSPGESLWQIARQYSTSVAHLQQLNNLAQGQAIQPGQVLKLGDVD*