ggKbase home page

SCNpilot_expt_500_bf_scaffold_3267_4

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 46 / 55 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: comp(2607..3029)

Top 3 Functional Annotations

Value Algorithm Source
MerR family transcriptional regulator n=1 Tax=Rhodanobacter sp. 115 RepID=I4VHX1_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 140.0
  • Bit_score: 279
  • Evalue 2.00e-72
MerR family transcriptional regulator {ECO:0000313|EMBL:EIL86812.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 140.0
  • Bit_score: 279
  • Evalue 2.80e-72
MerR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 57.1
  • Coverage: 140.0
  • Bit_score: 161
  • Evalue 2.50e-37

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter sp. 115 → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 423
ATGACCATCGGGAAGCTGGCGAAGCTTGCCGACGTCAGCACCGATACCCTCCGCTTCTATGAGGATGAACGCCTGCTGATCCCCGCAAAAAAGAGCGAAGCCGGCTATCGACTGTATGGCGAGGACGCGGTGCGCCGCCTGGACTTCATCAGACACGCCCAGCACTGCGGCATGACGCTATCGGAAATCCGCCAACTGCTTGAGATGAAGGCCGACGACCGCTCGTGCTGCAGTGACGTACGCAGCCTTGCGATCCGCAAGAAGCTTCAGCTCGAACAGAAGATCAAGACGATGCAAGCGATGTCCCAGGCGTTGAGCGAGCTGATCGAGATCTGCACGGACGAAGGCAAGCCGGTGGACGACTGCCCCATTCTGGCAGCACTGGAGTCCAGCATGGCAAACCAGCAGCACGAGCCACACTAA
PROTEIN sequence
Length: 141
MTIGKLAKLADVSTDTLRFYEDERLLIPAKKSEAGYRLYGEDAVRRLDFIRHAQHCGMTLSEIRQLLEMKADDRSCCSDVRSLAIRKKLQLEQKIKTMQAMSQALSELIEICTDEGKPVDDCPILAALESSMANQQHEPH*