ggKbase home page

SCNpilot_expt_500_bf_scaffold_4981_6

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 46 / 55 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: 3037..4206

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI000348419F similarity UNIREF
DB: UNIREF100
  • Identity: 51.1
  • Coverage: 399.0
  • Bit_score: 360
  • Evalue 2.50e-96
  • rbh
Carboxypeptidase {ECO:0000313|EMBL:EYR68382.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.9
  • Coverage: 407.0
  • Bit_score: 353
  • Evalue 3.20e-94
peptidoglycan-binding domain 1 protein similarity KEGG
DB: KEGG
  • Identity: 47.6
  • Coverage: 252.0
  • Bit_score: 216
  • Evalue 1.40e-53

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Lysobacter capsici → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1170
ATGAGCAATCCGTTGTTGGATTTGATCGTCCGTGGTGAGTCCGGTGCCGCTGGCTACAACGCCTACAACCGCGGCACTTACGTCGATCTGCATGGCGGCAAGCATATTCGCGGTCCAAGCGGCGCAATCGACTTTTCCAGCCTGACCGTGGGCCAGGTACATGATCTGCAACATCTTCGAGGCGACGACCCTCACCGGGTGTTCGCGGTCGGCAGGTATCAGGTGATTCCCTCCACCATGGACGGCGCGATCACCAAGCTGAACCTGGATCGCGATCTACCGTTCTCGACGGCCCTGCAGGATCGAATCTTCTCGGAGTATTTGATCGTCGACAAACGGCCAGCCATTCACGGATATGTCACCGGCCAACCGGGAATCACTTTGGAGGCCGCCCAGCGAAGTCTGGCGGCGGAATGGGCCAGTTTCGGTGATCCGGATCAAGGCGGCGCCAGCCATTATGGCGGCGCCAACCACGCCAGTATCACCCTGGCGCAATCGGCAAGCGCCCTGAACCAGATGCGGACCACGTATCAGGCCGACATCGCCTGCGGCTTCTCGCCGTCCGAAGCGTGGAAGCACGTCACCGCCAGCGATCACCAGCGCTCGTCCTCCGATGACGAATCACCGTCGAACCACCTGCGACGCCAAGGCAATCACGGTGATGCCGTGCGAACCTTGCAGAGCACACTGGCCGCCTTGGGTTACTGCGATGCTCACGGTCGCTCACTGAAATCCGACGGCGACTTTGGCTCGAACACCCATTCTGCGGTCGTGGCTTTCCAGCGCGAACATCACTTGGCAGTCGACGGCAAGGTCGGCCCGCGAACGCAACACGCGCTTGATCTGGCCTTGCGACAAAAGGATCGCGTCGCCACCACGTGGCTAGACGATCTGCGCCACCCGGATCACGCGCTGTACCAGCAGGCACTGGCAGGCGTGCACAGGATCGATGCGCAGCTCGGCCGACACTCTGACACGCGCAGCGAGAATCTTGCCGCCGCCATCGTTGTCGCCGCGCGCCGCCAAGGCCTGGGTCGCATCGACCAAGTGGTACTGTGCGAAGACGGTGAGCGTGCGTTCGTGCTGCAGAACGGATTGCCTGCGCGAATGGCCCACGTGCAAACCGCCGACGCGGTACACACGTCGATCATGGACAGCAGCGTCGCCTGA
PROTEIN sequence
Length: 390
MSNPLLDLIVRGESGAAGYNAYNRGTYVDLHGGKHIRGPSGAIDFSSLTVGQVHDLQHLRGDDPHRVFAVGRYQVIPSTMDGAITKLNLDRDLPFSTALQDRIFSEYLIVDKRPAIHGYVTGQPGITLEAAQRSLAAEWASFGDPDQGGASHYGGANHASITLAQSASALNQMRTTYQADIACGFSPSEAWKHVTASDHQRSSSDDESPSNHLRRQGNHGDAVRTLQSTLAALGYCDAHGRSLKSDGDFGSNTHSAVVAFQREHHLAVDGKVGPRTQHALDLALRQKDRVATTWLDDLRHPDHALYQQALAGVHRIDAQLGRHSDTRSENLAAAIVVAARRQGLGRIDQVVLCEDGERAFVLQNGLPARMAHVQTADAVHTSIMDSSVA*