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SCNpilot_expt_500_bf_scaffold_6017_10

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 46 / 55 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: comp(10718..11494)

Top 3 Functional Annotations

Value Algorithm Source
3-deoxy-manno-octulosonate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00057, ECO:0000256|SAAS:SAAS00089008}; EC=2.7.7.38 {ECO:0000256|HAMAP-Rule:MF_00057, ECO:0000256|SAAS:SAAS00089008};; CMP-2-keto-3-deoxyoctulosonic acid synthase {ECO:0000256|HAMAP-Rule:MF_00057}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.2
  • Coverage: 251.0
  • Bit_score: 449
  • Evalue 2.90e-123
3-deoxy-manno-octulosonate cytidylyltransferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WIN9_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 89.2
  • Coverage: 251.0
  • Bit_score: 449
  • Evalue 2.00e-123
  • rbh
3-deoxy-D-manno-octulosonate cytidylyltransferase similarity KEGG
DB: KEGG
  • Identity: 88.4
  • Coverage: 251.0
  • Bit_score: 442
  • Evalue 1.00e-121
  • rbh

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 777
ATGTCGCTTTCCCGCTCGTTCATCGTGGCCATCCCGGCCCGGCATGGCTCGACCCGGCTGCCGGGCAAGCCCCTGCGTGACATCGGCGGGGTGCCGATGGTCGTGCGCGTGGCGCAGCGCGCACTGCAAGCCGGCGCCAGCTGCGTGGTGGTGGCGGTGGACGACGAGCGCATCGCCGAGGCGCTGGCCGGCCAGCGCGAGGTGCAGATCTGCATGACCCGCCGCGACCACGCCTCCGGCAGCGACCGGCTGGCCGAGTGCGCGGAGCAGCTTGGCTGGGCCGACGACAGCATCGTGGTCAACCTGCAAGGCGACGAACCGTTCGCGCCGGCCGCCGGCATCCGCGCCGTCGCCCAGGCGCTGGCCGGTGACGATGCGCCGGTGGCCACGCTGGCCACGCCGATCATCGACGCCGAGGAGCTGTTCGATCCTAACGTCGTGAAACTGGTGCGCACCGGCAACGGGCGCGCGCTGTATTTCAGCCGCGCGCCGATGCCGTGGGCGCGTGATGCGTTCGCGACGGACCGGCACGCGCTGCCGTCCGGCACTCCGTTCCTGCGCCACATCGGCATTTATGCCTATCGGGCCGGGTTCCTGCGTCGCTACACGCAGTTGTCGCGCACGCCGCTGGAACAGACCGAATCGCTGGAGCAGTTGCGCGTGCTCGAGCACGGCCACGCGATCGCGGTGCGGCTGACACCCGAGCCGTTTCCCCCGGGCATCGATACCGAGGCGGATCTGGAACGCGCCGAGCTGTGGTTGCGCTCACACCCGTGA
PROTEIN sequence
Length: 259
MSLSRSFIVAIPARHGSTRLPGKPLRDIGGVPMVVRVAQRALQAGASCVVVAVDDERIAEALAGQREVQICMTRRDHASGSDRLAECAEQLGWADDSIVVNLQGDEPFAPAAGIRAVAQALAGDDAPVATLATPIIDAEELFDPNVVKLVRTGNGRALYFSRAPMPWARDAFATDRHALPSGTPFLRHIGIYAYRAGFLRRYTQLSRTPLEQTESLEQLRVLEHGHAIAVRLTPEPFPPGIDTEADLERAELWLRSHP*