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SCNpilot_expt_500_bf_scaffold_6017_20

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 46 / 55 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: 20486..20947

Top 3 Functional Annotations

Value Algorithm Source
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC:2.1.1.61) similarity KEGG
DB: KEGG
  • Identity: 75.2
  • Coverage: 153.0
  • Bit_score: 232
  • Evalue 7.40e-59
tRNA-specific 2-thiouridylase MnmA n=1 Tax=Rhodanobacter denitrificans RepID=I4WY10_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 75.8
  • Coverage: 153.0
  • Bit_score: 234
  • Evalue 8.00e-59
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 76.0
  • Coverage: 154.0
  • Bit_score: 238
  • Evalue 7.80e-60

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Taxonomy

RIFOXYA1_FULL_Rhodanobacter_67_6_curated → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 462
ATGTATTACACCCTGGGCCAGCGCAACGGACTCGGCATCGGCGGCCGGCATGGCGCCAGCGGCGAGCCCTGGTTCGTGGTGGGCAAGGACGTGGCGGCCAACGTGCTGATCGTCGCCCAGGGCGGCGAGAACCACTGGCTGCTGTCGCGGCGATTGCATACCGAGGCACCACACTGGATCGCCGGCGAGCCGCCGGGCACCGAGTTTCGCTGCACGGCGCGCACGCGCTACCGTCAGACCGACCAGGCGTGCTCGGTCAGCGTCGGCGAGGCCGGTCTTGCCGTCACGTTCGATGTGCCGCAGCGTGCCGTCACGCCGGGTCAATCGGTCGTTTTCTACGCTGGCGAGGTCTGCCTCGGCGGCGCGGTGATCATGGCAACCGATGCCGCCTACGGCGGCTTGCTGCCAGCCTTCACCCTCACCACCACAGCGCAACTCAAGGAATCGCAAATCCGTGTTTGA
PROTEIN sequence
Length: 154
MYYTLGQRNGLGIGGRHGASGEPWFVVGKDVAANVLIVAQGGENHWLLSRRLHTEAPHWIAGEPPGTEFRCTARTRYRQTDQACSVSVGEAGLAVTFDVPQRAVTPGQSVVFYAGEVCLGGAVIMATDAAYGGLLPAFTLTTTAQLKESQIRV*