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SCNpilot_expt_500_bf_scaffold_6017_27

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 46 / 55 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: comp(29867..30136)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S15 n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WKE3_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 97.8
  • Coverage: 89.0
  • Bit_score: 173
  • Evalue 9.80e-41
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343, ECO:0000256|RuleBase:RU003920}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.8
  • Coverage: 89.0
  • Bit_score: 173
  • Evalue 1.40e-40
ribosomal protein S15 similarity KEGG
DB: KEGG
  • Identity: 95.5
  • Coverage: 89.0
  • Bit_score: 170
  • Evalue 2.60e-40

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 270
ATGTCCCTTACCGCAGAACAGACCAGCAAGATCATTGCTGATTTCGGCCGCGTGCCGAACGATACGGGCTCGACTGAAGTCCAGGTGGCCCTGCTGTCCGCCCGCATCGACCATCTCACCGGTCACTTCAAGGATCACATCCAGGACCACCACTCGCGTCGTGGCCTGCTCAAGCTCGTCAACCAGCGCAAGCGCCTGCTCAGCTACCTGAAGGATCGCGATCTTGCGCGCTACCAGACCCTGATCGAACGCCTCGGCCTGCGCCGGTAA
PROTEIN sequence
Length: 90
MSLTAEQTSKIIADFGRVPNDTGSTEVQVALLSARIDHLTGHFKDHIQDHHSRRGLLKLVNQRKRLLSYLKDRDLARYQTLIERLGLRR*