ggKbase home page

SCNpilot_expt_500_bf_scaffold_6599_11

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 46 / 55 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: 6281..7642

Top 3 Functional Annotations

Value Algorithm Source
Tryptophan--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965}; EC=6.1.1.2 {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965};; Tryptophanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00140}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.7
  • Coverage: 453.0
  • Bit_score: 758
  • Evalue 6.60e-216
tryptophanyl-tRNA synthetase (EC:6.1.1.2) similarity KEGG
DB: KEGG
  • Identity: 85.0
  • Coverage: 453.0
  • Bit_score: 748
  • Evalue 1.20e-213
Tryptophan--tRNA ligase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WE79_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 85.7
  • Coverage: 453.0
  • Bit_score: 758
  • Evalue 4.70e-216

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1362
ATGCAGACTCGAGTCCTTACCGGCATCACCACCACCGGCACCCCCCACTTGGGCAACTACGTGGGCGCGATCCGTCCTTCGGTCGAGGCCAGCCGACGGGCGGACGTGGATGCGTTTTTCTTCATGGCCGATTACCACGCCCTGATCAAGAGCGATGACGCGGCGCGGATCGAGCGGTCGCGGCTGGAGATTGCGGCGAGCTGGCTGGCGGCGGGGCTCGATCCGGCGCGGGTGACGTTCTATCGGCAATCGGACATCCCGGAAATCCCCGAGCTGACCTGGTTCCTCACCTGCATCGCGTCCAAGGGCATGCTCAACCGCGCGCACGCATACAAGGCGGCGGTGGACAAGAACGCCGCGGCAGGCGAGGACGCCGACGCCGGCATCACCGCCGGCCTGTACATGTATCCGGTGCTGATGGCGGCCGACATCCTGGCGTTCGATGCGCACCAGGTGCCGGTGGGGCGCGACCAGATCCAGCACATCGAGATGGCGCGCGATCTCGGCCAGCGTTTCAACCATCTGCATGGCCGCGAGTTCTTCGTGCTGCCCGAGGCGCTGATTGAGGAGCAGGTGGCCACGCTGCCGGGGCTCGACGGACGCAAGATGTCCAAGAGCTACGACAACACCATCCCGCTGTTCGCTGGCGGCAAGAAGCAGCTGCGCGAGGCGATCATGCGCATCGTCACGGATTCGCGCCTGCCCGGCGAGCCGAAGGACCCTGACAGCTGCGCGCTGTTCACCATCTTCCGCGCCTTTGCCAGCGAGACCGAAACGGCGGCATTCCGCCGCGCGTTGGAGGAGGGGCTCGGCTGGGGTGAAGCCAAGCAGGTGCTGTACGAGCGCATCGAAGCCGACGTGGCGCCGATGCGCGAGCGCTACGACACGCTGATGGCCGACCCGGCCGCGATCGAGGTGATCCTGCAGGAAGGCGCGCGCAAGGCGCGGGCGATCGCCACGCCGAAAGTGGCCGGCCTGCGCGAGGTGCTGGGTTTGCGTGCGATGCGCACGGCTGGCGCAGCGGCGGGCCCGGCGCGGCCGGCGAAGGTGCAGCGCGTCGCACGGCTGGCCAGTTTTCGCGACGACGACGGCCGCTTTCGTTTCCGCCTGTTCTCGGCCGAGGGCGAGGAGCTGCTGCTGTCGGTGCCGTTCGCCGACCCCAAGGCGGCGGGTGCAAGCCAGAAGCGCCTGAAGCAGTTGGGCGCCACCGCGGCCGTGGTGCAGGTGCGCGGCGCGAATCTGGTGCTGGAGATCGATGGCGAGGCCGTGGCGAGCACGCCGGATTATCCGGACGAAGCCGCGCGCGAGCAGGCGCTGACGCGCCTGCGGCTCGCGCTGGACCAGCTCGCGACGCAGGATTGA
PROTEIN sequence
Length: 454
MQTRVLTGITTTGTPHLGNYVGAIRPSVEASRRADVDAFFFMADYHALIKSDDAARIERSRLEIAASWLAAGLDPARVTFYRQSDIPEIPELTWFLTCIASKGMLNRAHAYKAAVDKNAAAGEDADAGITAGLYMYPVLMAADILAFDAHQVPVGRDQIQHIEMARDLGQRFNHLHGREFFVLPEALIEEQVATLPGLDGRKMSKSYDNTIPLFAGGKKQLREAIMRIVTDSRLPGEPKDPDSCALFTIFRAFASETETAAFRRALEEGLGWGEAKQVLYERIEADVAPMRERYDTLMADPAAIEVILQEGARKARAIATPKVAGLREVLGLRAMRTAGAAAGPARPAKVQRVARLASFRDDDGRFRFRLFSAEGEELLLSVPFADPKAAGASQKRLKQLGATAAVVQVRGANLVLEIDGEAVASTPDYPDEAAREQALTRLRLALDQLATQD*