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SCNpilot_expt_500_bf_scaffold_7465_3

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 46 / 55 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: 3840..4340

Top 3 Functional Annotations

Value Algorithm Source
Putative efflux protein, MATE family n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WE29_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 95.2
  • Coverage: 145.0
  • Bit_score: 270
  • Evalue 1.40e-69
putative efflux protein, MATE family similarity KEGG
DB: KEGG
  • Identity: 93.8
  • Coverage: 145.0
  • Bit_score: 264
  • Evalue 3.20e-68
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 96.6
  • Coverage: 145.0
  • Bit_score: 274
  • Evalue 8.20e-71

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Taxonomy

RIFOXYA1_FULL_Rhodanobacter_67_6_curated → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 501
ATGAATCCGTTTCGTCCCGAGCGTGCGCGCCTGCGGCATGAGGTGCGCGCCACCGTGCGCCTGGCGCTGCCGCTGATCGCCGCGCAGCTGGCGGCGGTCGGCAGCAACGTGATCGACGCGGTGCTGGCCGGCCACGTCAGCGCGCACGTGCTGGGCGCGGTGGCGGTGGGCGCCAGCATCTGGTCGCTGGCGATCGTCTGCGGCATCGGCATGATGATGGCGGTGCCGCCGTCGGTGGCGCAGCTGGACGGTGCCGGTCGGCGCCATGAGGTCGGCGCGGTGTTCCACCAGGCGCTGTGGCTGGCGCTGGGCATGGGCGCGCTGCTGTGGTTCGCGGTGCGCCATGCGGAGCCGCTGATCGAGCTGATCGGGGTGACGGCGAGCCTGCGCCACGACGTGCAGCGCTTCCTGCTGGCGATCAGCTGGGGCGCGCCACGCGGCCGTCGATGTACTTCAGCCTCGGCGGGCTGGTGCTGCTGGTGCCGCTGGGCTATGTATTGA
PROTEIN sequence
Length: 167
MNPFRPERARLRHEVRATVRLALPLIAAQLAAVGSNVIDAVLAGHVSAHVLGAVAVGASIWSLAIVCGIGMMMAVPPSVAQLDGAGRRHEVGAVFHQALWLALGMGALLWFAVRHAEPLIELIGVTASLRHDVQRFLLAISWGAPRGRRCTSASAGWCCWCRWAMY*