ggKbase home page

SCNpilot_expt_500_bf_scaffold_8141_1

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 46 / 55 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: comp(3..1673)

Top 3 Functional Annotations

Value Algorithm Source
Multidrug ABC transporter ATPase/permease n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WRJ3_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 86.9
  • Coverage: 558.0
  • Bit_score: 968
  • Evalue 3.70e-279
  • rbh
Multidrug ABC transporter ATPase/permease {ECO:0000313|EMBL:EIM02085.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.9
  • Coverage: 558.0
  • Bit_score: 968
  • Evalue 5.20e-279
ABC-type multidrug transport system, ATPase and permease component similarity KEGG
DB: KEGG
  • Identity: 86.6
  • Coverage: 558.0
  • Bit_score: 963
  • Evalue 2.90e-278
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1671
ATGATCTTTCGCTGGTTCGAATCCCTCATCGACGCGTTCAAGGAACCGGTCGACGGCATGCCGCCGCGGCCGGTGTGGCGTTTCTACGTGTTCTATCTGCGCCAGGTGTGGCCGGTGTTCGCCGCCACGCTGGTGGTCGGCTTTGGCGTGGCGGTGGTGGAGGTGTCGCTGTTCGGCTTCATCGGGCGCATCGTGGACATGGCCAGCGGCACGCCGGCGGACCTGTTCCGCCTGCACGGCCAGGCGCTGATCTGGATGGCGCTGGTCGCACTGGTGGCGCGGCCGCTGCTCGGCGGCCTGCACGACTTGCTGGTGAACCAGGCGATCCTGCCCAGCCTCACCAACCGCATCCGCTGGCAGCACCATCGCTACGTGATCCGCCAGAGCCTGGGCTTCTTCCAGAACGATTTCGCCGGGCGCATCGCCAACCGCATCATCCAGACCGGCGCCTCGCTGCGCGATTCGGCCGTGCAGATCGTGGACGCGATCTGGTACATCGTGATCTACACCGGCAGCGCCATCGCGCTGTTCGCGCAGGCCGACGGCTGGCTGGCGGTACCGCTGACGGCGTGGATCTTCTGCTACATCGGCTTGCTGGCCTTCTTCATTCCGCGGGTGAAACAGCGCTCGTGGAAATCCTCGGAGGCGAAATCGAAGCTGATGGGCCGCGTCGTCGACGGCTACAGCAACGTGATGACGCTGAAGCTGTTCGCCCACACGCGCCGCGAGGAGGCGTACGTGGCCGAGGCGATGGGCGAGTTGATCGACAAGCATCGCCTGACGACCCGCCTGACGACGGCCATGGACGTCAGCATCACCGCGCTCAACGGCTTCCTCATCACCGGCACCTCGGCGCTGGCGATCTGGCTATGGAGCGAGGGGCGGGTGACCACCGGGGCGATTGCGTTGTCGATCGGGCTGGTGATCCGCATCAACAACATGTCCGGCTGGATCATGTGGGTGGTCAACGGCATCTTCGAGAACGTCGGCACCGTGCAGGACGGCATCACCACCATCTCGCAGCCGCGCGCGGTGCAGGACCGCGAAGGCGCGATGCCGCTGGAGGTGACCAACGGCGCGGTGCGCTTCGAGCACATCCACTTCCACTACGGCAAGCGTGGCGGCATCATCGCCGGGCTGGATCTGGACGTGCGCGCGGGCGAGAAGATCGGCCTGGTCGGCCCGTCCGGCGCCGGCAAGTCCACCCTGGTCAACGTGCTGCTGCGGCTGTACGACCTCGAGGCCGGGCGCATCCTGATCGACGGCCAGGACATCGCACACGTCACCCAGGAAAGCCTGCGCTCGCAGATTGGCGTGGTCACCCAGGACACTTCGCTGCTGCACCGTTCGATCCGCGACAACCTGCTCTATGGCCGTCCCGACGCCAGCGAAGCGCAGATCATGGAAGCCGTGCGCAAGGCGCGCGCCGACGAGTTCATCCCGCAGCTCAGCGATGGCGAGGGCCGTCGCGGCTACGACGCGCTGGTCGGCGAGCGCGGCGTGAAACTCAGCGGCGGCCAGCGCCAGCGCATCGCGATCGCCCGCGTGCTGCTGAAGGACGCGCCGATCCTGGTGCTGGACGAAGCGACCTCGGCGCTCGACTCCGAAGCGGAAGCGGCGATCCAGGACAGCCTGGACATCCTGATGCAGGGCAAGACGGTGATCGCGATC
PROTEIN sequence
Length: 557
MIFRWFESLIDAFKEPVDGMPPRPVWRFYVFYLRQVWPVFAATLVVGFGVAVVEVSLFGFIGRIVDMASGTPADLFRLHGQALIWMALVALVARPLLGGLHDLLVNQAILPSLTNRIRWQHHRYVIRQSLGFFQNDFAGRIANRIIQTGASLRDSAVQIVDAIWYIVIYTGSAIALFAQADGWLAVPLTAWIFCYIGLLAFFIPRVKQRSWKSSEAKSKLMGRVVDGYSNVMTLKLFAHTRREEAYVAEAMGELIDKHRLTTRLTTAMDVSITALNGFLITGTSALAIWLWSEGRVTTGAIALSIGLVIRINNMSGWIMWVVNGIFENVGTVQDGITTISQPRAVQDREGAMPLEVTNGAVRFEHIHFHYGKRGGIIAGLDLDVRAGEKIGLVGPSGAGKSTLVNVLLRLYDLEAGRILIDGQDIAHVTQESLRSQIGVVTQDTSLLHRSIRDNLLYGRPDASEAQIMEAVRKARADEFIPQLSDGEGRRGYDALVGERGVKLSGGQRQRIAIARVLLKDAPILVLDEATSALDSEAEAAIQDSLDILMQGKTVIAI