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SCNpilot_expt_500_bf_scaffold_8756_5

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 46 / 55 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: comp(4038..4250)

Top 3 Functional Annotations

Value Algorithm Source
Cro/Cl family transcriptional regulator n=1 Tax=Pseudomonas tolaasii RepID=UPI0003634733 similarity UNIREF
DB: UNIREF100
  • Identity: 78.6
  • Coverage: 70.0
  • Bit_score: 109
  • Evalue 1.40e-21
Cro/Cl family transcriptional regulator {ECO:0000313|EMBL:KGE69442.1}; TaxID=1324332 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens LMG 5329.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.0
  • Coverage: 70.0
  • Bit_score: 111
  • Evalue 3.90e-22
cro/C1-type HTH DNA-binding domain protein similarity KEGG
DB: KEGG
  • Identity: 75.7
  • Coverage: 70.0
  • Bit_score: 105
  • Evalue 6.30e-21

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Taxonomy

Pseudomonas fluorescens → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 213
ATGCCGATCATCATCGAACTGGATGTCATGCTGGCGCGGCGCAAGATGAAATCCAGGGACCTGGCCGCGGCGGTCGGCATCACCGAAGCAAACCTGTCCCTGCTCAAGCAGGGCAAGGTGAAAGGCGTACGCTTCAGCACGCTCGACGCGATCTGCACGGCACTGGCGTGCCAGCCCGGCGACCTGCTGCGCCACGTCGACGACGAGCCCTGA
PROTEIN sequence
Length: 71
MPIIIELDVMLARRKMKSRDLAAAVGITEANLSLLKQGKVKGVRFSTLDAICTALACQPGDLLRHVDDEP*